Populus alba (white poplar): 118050936
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Entry
118050936 CDS
T07314
Name
(RefSeq) probable cyclic nucleotide-gated ion channel 20, chloroplastic
KO
K05391
cyclic nucleotide gated channel, plant
Organism
palz
Populus alba (white poplar)
Pathway
palz04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
palz00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
118050936
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
palz04040
]
118050936
Ion channels [BR:
palz04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
118050936
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GFIT
Motif
Pfam:
Ion_trans
DUF6525
cNMP_binding
Ion_trans_2
Motif
Other DBs
NCBI-GeneID:
118050936
NCBI-ProteinID:
XP_034917296
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Position
15:7990833..8028495
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AA seq
786 aa
AA seq
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MANHDKDDIPMLSDAHPKSVDENVDSRFRPFLSRTQSASTSIPLDSMESYGSETNLVGFT
GPLRSARKAPLVQMSGPLYINRNTENVFLANHGVSARKMVDPKPEKYPSFNGMDKNDWDD
KYTATNAHLMRSGQLGMCNDPYCTTCPSYYHSRSSQQRHAKTSSIFDSKFHSVLYGDAKG
WARRFNNAINSYIPGVMNPHAKVVQNWNKFFVISCLVAIFVDPLFFILLSVKQKENCIVI
DWGMTKAVVSFRCLTDTIYLLNIFLQFRLAYVAPESRVVGAGELVDHPKKIAKHYLRGYF
FIDLFVVLPLPQIIVLALIPRGLDSSSANYAKNLLQAAILVQYIPRLFRFIPLLIGQSPN
GFIFETASANFFINLFTFVLSGHIIGSLWYLFGLQRVNQCLRDACHNSGYQEECKKFIDC
SRHENAAEQQVLSQNWTHWTNNANASDCFTPDHFSYEIYVQAVNLTGENTITRYTYSLFW
GFQQISTLAGNQVPSYFIWEVLFTMAIIGIGLLLFAFLIGNMQNFLQALGRRRSEMSLRR
RDVDQWMKHRRLPVELRRRVIEAERYHWASTRGVNEEMLLENLPEDLQRDIRRHLFKFVK
KVWIFHLMDEHVLDAVCEKLKQKIYIKGSEVFCVGGLVEKMVFIVRGKLESIGHDGTVVE
LSEGNVCGEELLTWFLEHSSVSKDGRKIKISGQRLISSRTVRCLANVEAFSLSAADLEQV
TSLFARHLRNPLVQGAIRYQSPYWRALAATRIQVYWRYRQKRLKRSKTTQSNHFAPQSNH
SSFSRV
NT seq
2361 nt
NT seq
+upstream
nt +downstream
nt
atggctaaccatgacaaagatgatattccaatgctgtcagatgcacatccaaagtcagtg
gatgaaaatgtggattctcgatttcggccatttctttcccggactcaaagtgcatcaact
tccattcctttggattccatggagtcctatggttctgaaaccaaccttgttggctttact
ggtccactgcgtagtgcaagaaaagctccactggtacagatgagtggtccattatatatc
aaccggaacactgaaaatgtgtttctggcaaatcatggtgtatcagctcgcaaaatggtg
gatcccaagccagaaaaatatccatcttttaatggaatggataagaatgactgggatgac
aagtatactgctacaaatgcccatttaatgaggtctgggcaactaggcatgtgcaatgat
ccttactgcacaacatgcccatcatattaccattctagatcttcacagcaaagacatgca
aaaacttccagtatatttgattcaaagtttcatagtgttctctatggagatgctaaaggt
tgggcaaggagattcaataatgctataaactcatatattcctggagttatgaatcctcat
gcgaaagttgttcagaactggaacaagttttttgtcatttcttgcttggtggcaattttt
gttgaccccttgtttttcatcttgctgtcagtgaaacagaaagaaaattgcatagtcatt
gattggggaatgactaaagcagttgtgtcttttaggtgcttgactgatacaatctacttg
ctgaacatatttcttcagtttagattagcttatgtggctcctgaatctagagtggttggt
gctggagagttagttgaccatccaaagaaaattgctaagcactatctccgaggatatttt
tttattgacttatttgtggtattaccacttccacagatcattgtgctagcactcatacca
cgaggattggattcctccagtgcaaactatgccaagaatcttttacaggcagctattctt
gtccaatacattccaaggttgtttaggtttattcctcttctgattggtcagtctccaaat
ggcttcatatttgagacagcttcggcaaacttctttataaatcttttcacctttgtgttg
tctgggcatatcattgggtcgttgtggtatctctttgggttgcagagggtaaatcaatgt
cttcgtgatgcttgccataattctggttatcaagaagagtgcaagaagtttatagattgt
agtcgacacgagaatgctgctgaacaacaagtgctaagtcaaaactggacacattggaca
aacaatgctaatgccagtgattgttttactccggatcatttttcttatgaaatctatgtc
caggcagtcaatctcaccggggaaaataccatcaccagatacacatattcattattttgg
ggattccagcaaatcagtactctcgctggaaaccaagtaccaagctattttatttgggaa
gtcctctttaccatggcaataattggaattggcctcttgctctttgcttttctcatagga
aatatgcagaactttcttcaggctctcggtaggaggaggtcagaaatgtcactaaggcga
cgcgatgttgatcagtggatgaaacatcggcgcttgccggtagagctaagaaggagagtg
atagaagctgaacggtatcattgggcttctactagaggggtaaatgaagaaatgcttttg
gagaatttgcctgaggacctccagagggatattagaagacacctcttcaaattcgtcaag
aaagtatggatttttcacctgatggatgaacatgtcttggatgcggtttgtgagaaatta
aaacagaaaatatacatcaagggaagtgaagttttttgtgttggtggtctggttgagaag
atggtttttattgtgcgtggaaaattggaaagcatcggacatgatgggacggtggtagaa
ttatctgaagggaatgtttgtggtgaggaacttctcacatggtttcttgagcatagttca
gtgtccaaagatggaaggaaaatcaagatttctggacagcgtttgattagcagcaggaca
gtaagatgcttagcaaatgtagaagcattttcactcagtgctgctgaccttgaacaagtc
accagcctttttgcaagacacttgcggaatccccttgtccaaggagccataaggtatcaa
tctccctactggagagcccttgctgctacccgcattcaagtttattggagatatcgacag
aagcgtctaaagcgtagcaagaccactcaatcaaatcattttgcccctcaatcaaatcat
tcttcgttctcaagggtttag
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