KEGG   Populus alba (white poplar): 118051057
Entry
118051057         CDS       T07314                                 
Name
(RefSeq) helicase and polymerase-containing protein TEBICHI isoform X1
  KO
K02349  DNA polymerase theta [EC:2.7.7.7]
Organism
palz  Populus alba (white poplar)
Brite
KEGG Orthology (KO) [BR:palz00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:palz03400]
    118051057
Enzymes [BR:palz01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     118051057
DNA repair and recombination proteins [BR:palz03400]
 Eukaryotic type
  Other factors with a suspected DNA repair function
   DNA polymerases
    118051057
SSDB
Motif
Pfam: DNA_pol_A POLQ_helical HTH_61 DEAD Helicase_C DUF7898 Helicase_dom4_arc ResIII HHH_5 LAMTOR
Other DBs
NCBI-GeneID: 118051057
NCBI-ProteinID: XP_034917474
LinkDB
Position
18:3048615..3068176
AA seq 2174 aa
MASDSPRTRIDQFFASRKRKSSSPNLKSGRIEKDARSKVVEGSPSAKGTLDNYLVNSKDD
NRGGGFLVKRSLALGIDEVSNEEEEESLVSGRLCVGSCEGGKVVQKEMSQGSSNAGNVGN
IAVERVVKGCLDVGNGVENSELKQFATDFLSLYCGELQSTATSPSKTKLNDHKRNGGPLL
VDVDYKTSKKRLCMSNQLYSEVETPCPIEKKPEDKQSAFVVKNGASVFNSFGEVAVGNDP
VQLQTSLRKCNKMANSTVNMAECCTPGSSICRGRGSDGPKSTRGSSIFSPGDAFWNEAIQ
VADSLFSEADNPFIQAVGNIINGKSGNLSRELLNEAGSRGCSLEFIRKHMEKVSPLPVKQ
LDLLFEDRNLEVSTPPSAKDDSNVDRSSEKSEHGSINLKSLQNANIVTYHLKDEPREEMH
KEEEKTTVDTETTKKVDLPNQDADSIIYHLPVKDSRNVIDNNECVEAGTPSSFGPLKDRL
DLSNWLPLEVCSIYKRKGISKLYPWQVDCLQVDGVLQRRNLVYCASTSAGKSFVAEILML
RRVISTGKIALLVLPYVSICAEKAEHLEGLLEPLGKHVRSYYGNQGGGTLPKDTSVAVCT
IEKANSLINRLLEEGRLSEVGIMVIDELHMVGDQSRGYLLELLLTKLRYAAGEGNTESSS
GESSGTSSKGDAAHGLQIVGMSATMPNVAAVADWLQAALYQTNFRPVPLEEYIKVGNTIY
DKKMDIVRTLSRAADLGGKDPDHIVELCNEVVQDGHSVLIFCSSRKGCESTARHVSKFVK
KFSINIQNESEFGDITSAIDALRRCPAGLDSTLEETLPSGVAYHHAGLTVEEREIIETCY
RKGLLRILTATSTLAAGVNLPARRVIFRQPRIGRDFIDGTRYKQMAGRAGRTGIDTKGES
VLICKPEELKRIMGLLNESCPPLQSCLSEDKNGMTHAILEVVAGGIVQTANDIHRYVRCT
LLNSTKPFRDVVKSAQDSLRWLCHRKFLEWNEDTKLYGTTPLGRAAFGSSLCPEESLIVL
DDLSRAREGFVLASDLHLVFLVTPINVDVEPNWELYYERFMELSILDQSVGNRVGVSEPF
LMRMAHGAPMRSLNRSIDNTKALHASKYENQSGVTNKSAISDDQTLRVCKRFFVALILSR
LVQEAPVPEVCEAFKVARGMVQSLQENAGRFASMVSVFCERLGWHDLEGLVAKFQNRVSF
GVRAEIVELTNIPYVKGSRARALYKAGLRTPQAIAEASIPEIGKALFESSSWSAQEGSAQ
RRVQLGIAKKIKNGARKIVLDKAEEARVIAFAAFKSLGFNVPQFSPPLLSNAPENLVEQG
NAGTLFGDKSNIILHVDQRDHASSMLFIEGSKNSGKVTMGTREDKLMKPVSVGLVVAAEG
NSNGPIQCYIGAENSTVPAKKSSNLGTELCTTGDNKNSAETILSVQFGHSGDGTGTNDRI
TDTRVQGQCSGENLSSDKKDSACKKGPTNASNISGGFDSFLDLWDATQEFYFDIHYNKRS
EVNSVSLFEIHGIAICWENSPVYFINLPKDLLWSHKQRNDSTPSQSGDKNNVQPPENWLE
IVRKRWNKIGEIMGKRGVLKFTWNLKVQLQVLKGAVVSIQRFGCPSFPRKIFGPELIDSS
HLTLSPINIKEAIDMCIVAWILWPDEERSSNPNLEKEVKKRLSSEAVAAANQNGRWKNQM
RRVAHNGCCRRVAQTRALCSGLWKLLTSEGLFEALKNIEIPLVNVLADMELWGIGVDMEG
CLNARTVLGKRLRYLEKKAYKLAGMTFSLYTAADIANILYRHLKLPIPEGHDKGKKHPST
DKHCLDLLRHEHPIVPVIREHRTLAKLLNSTLGSICSLARLSMETQKYTLHGHWLQTSTA
TGRLSIEEPNLQCVEHAVDFEMSSDKEGDDAEPEHYKINARDFFVPTQDNWLLLTADYSQ
IELRLMAHFSKDTALIKLLTKPHGDVFNLIAARWTGKPEASLSSVERDQTKRMVYGILYG
MGANTLAEQLDCSSDEAAEKIKSFKSSFPGVASWLHEAVASCREKGYVETIRGRKRFLSK
IKFGNSEEKSKAQRQAVNSICQGSAADLIKIAMINIHSLIVDGVDRPESSSLHANKFHML
KGQCRILLQVHDELVLEVDPSLINEAALLLQMSMEDAASLLVPLHVKLKVGRTWGSLKPF
LADQHINEVLVPES
NT seq 6525 nt   +upstreamnt  +downstreamnt
atggcgtctgattctcctcggactcgcatcgatcagttttttgcgtcgaggaagaggaaa
tcttcgtcgccgaatttgaagtcgggaaggatcgaaaaagatgcaagaagcaaagtagtt
gaagggtcacccagtgccaaaggaactttggataattacttggtgaactcgaaggatgat
aaccgtgggggtggtttcttggttaaaagaagcttggcattggggattgatgaagtttca
aatgaagaagaggaggaatctcttgtgtctggtcgattgtgcgtgggaagttgtgaaggc
ggcaaagtggtacagaaggaaatgtctcaaggttcgtccaatgcaggaaatgtggggaat
attgcggttgaaagggttgtgaagggttgcttggatgtggggaatggggttgagaattcg
gaactaaaacagtttgctactgattttttgtctctgtattgtggtgaacttcaatcaact
gcaacttcaccttcaaagacaaagttgaatgaccataagcgaaatggtggtccattgcta
gtggatgttgattataaaacatccaaaaagaggttatgcatgtccaatcagttatattct
gaagttgaaaccccttgtccaatcgagaagaagccagaagacaagcaatctgcttttgtt
gttaaaaatggagcatctgttttcaattcttttggagaggtagctgttggtaatgatcct
gttcagcttcaaacaagcttgagaaaatgcaacaaaatggctaactcaacggtaaatatg
gctgaatgctgtacaccaggatcatcaatttgtagaggacgtggtagtgatggtcccaaa
tctacacgtggaagctctatcttttcaccaggagatgcattttggaatgaagcaattcaa
gttgctgatagtttattttctgaagctgacaatccttttatccaggcagttggaaatatc
attaatgggaagtctggcaacctgtcacgggaattgttaaacgaagccggcagcagaggt
tgttcattggagtttataaggaagcatatggaaaaagtatctccactgcctgtcaaacaa
cttgacttgctatttgaggacaggaacttggaagttagcaccccaccttctgctaaagat
gattcaaatgtggacagaagcagtgaaaaatctgagcacggttctattaatctcaaaagc
ttacaaaatgcgaatattgtaacatatcatctcaaagatgagccaagagaagagatgcat
aaagaagaggaaaaaacaactgtggatacagagaccacaaagaaagtggatttgccaaat
caagatgccgatagcattatatatcatttgccagttaaagactccaggaatgtaattgat
aataatgagtgtgttgaagctggaactccttcaagttttgggccgctcaaggaccggtta
gatcttagcaactggcttcctctagaagtatgcagcatatataagaggaaaggaatttca
aaactgtatccttggcaggttgattgccttcaggtggatggtgttttgcagagacgaaat
cttgtatattgcgcgtctacaagtgctggtaaaagttttgttgcggaaattttgatgttg
cggcgggttatatcaactggaaagattgcgcttcttgtacttccctatgtatcaatttgt
gcagaaaaggcagaacatctggagggccttctggaacctcttggtaagcatgtccggagt
tattatggcaaccagggtggaggaacacttcctaaagatacttccgtagctgtctgcaca
atagagaaagcaaactccctaataaacagattactggaagagggtcgtctatcagaagtt
ggaatcatggtgatagatgaactacacatggttggtgatcagagcaggggttaccttttg
gaacttctgctgacaaagcttcgttatgctgctggtgaaggcaatacagaatccagcagc
ggagaaagctcaggtacaagcagtaagggtgatgctgctcatggtctgcaaattgttggg
atgagtgctaccatgcccaatgtggcagcagttgctgactggcttcaagcagcactatac
cagacaaatttccgaccggttccactagaagaatacattaaagttggcaacacaatttat
gacaagaaaatggatattgttagaacactttcaagagcagctgacctgggtggtaaagat
ccagatcatattgtggaactatgcaatgaggttgttcaagatggacattcagtgttaata
ttctgctctagtcgaaaaggatgtgaatcaactgcgaggcatgtttcaaaatttgtgaag
aagttttctattaacattcagaatgagagcgagtttggtgatattacttcggccattgat
gcactgcgaagatgtcccgcaggattggattcaacgttggaagaaactctaccttctggg
gttgcctatcatcatgctggcttgacggtagaggaaagagaaattattgagacctgctat
cgtaaaggtcttttgcgcatcttaactgctacatctaccttagctgccggggttaacctg
cccgctaggagggtcatttttcgacaacccagaattggtcgtgatttcattgacgggaca
aggtacaaacagatggctggtcgagctggtcgaactggaatagatactaaaggggaaagt
gtactgatttgcaaaccagaagagttaaaaagaattatgggacttcttaatgaaagctgt
ccaccattgcagtcgtgtctatctgaagataaaaatggaatgacacatgcaattttagaa
gttgtggctggtgggattgttcaaactgctaatgatattcatcgttatgttagatgtact
cttctcaattctacaaaaccgttcagggatgttgtgaaatcagcacaggattcacttagg
tggttgtgccacagaaaatttcttgaatggaatgaagatactaagctatatggcacaaca
cctctcggacgtgcagcttttggcagttctctttgtccagaagaatcacttattgtgcta
gatgatctttccagagcacgagaaggatttgtgcttgcgtctgatttgcatttagtgttc
ttagtcacaccaatcaatgttgatgttgagccgaactgggaattgtattatgaaaggttt
atggaattgtctatccttgatcagtctgttggaaatcgagttggagtttcagagccattt
ttgatgcggatggcacatggagcacctatgcgcagcttgaacagatcaatagataataca
aaagccttgcatgccagcaagtatgaaaaccaatctggggttacaaacaaaagtgccatt
tcagatgatcagacacttagggtgtgcaaaagattttttgttgctctcatcttgtcaaga
cttgtgcaggaagcacctgtacctgaggtgtgtgaagcttttaaagttgctagaggcatg
gtccaatccttacaagagaatgctggaagatttgcatctatggtttctgtgttttgtgaa
agacttggatggcatgatcttgaaggtctggttgcgaagttccaaaatcgtgtttcattt
ggagtgcgagcagagattgtggagctcactaatattccatatgttaagggttctagagca
agggcactctataaagcagggttgcgtacacctcaagctattgctgaagcatctattcct
gaaataggcaaagcactttttgaatcttcatcatggtctgcacaagaaggttcagcacaa
agacgcgtgcaattgggaattgcaaagaaaatcaagaatggtgcacgtaaaattgtactt
gacaaagcagaagaggcaagggttattgcttttgcagctttcaaatcacttggattcaat
gttccacagttttctccgcctttgttatccaatgcccccgaaaatcttgttgagcaagga
aatgcaggtaccttgtttggagataaatctaatatcattttgcatgtggaccaaagagat
catgcttcatctatgctgttcatagaaggtagcaagaattctggtaaagttacaatggga
accagagaagacaaactaatgaaaccagtcagtgttggattggtagttgctgcagaagga
aactcaaatggtcccattcagtgctatattggtgctgaaaattctacagtaccagctaag
aaatcttcaaatcttggcaccgagctttgtactactggtgataataagaatagtgcagaa
acaatcctctctgtacaatttggacatagtggtgatggaactgggaccaatgaccggatc
actgataccagagttcaggggcagtgtagtggagagaatttaagtagtgataaaaaggac
agtgcttgcaagaagggtcctactaatgcaagtaatatttctggtggatttgattctttc
ttggatctctgggatgctacccaagaattctattttgatatccattataacaagcgatca
gaagtaaattctgtcagcctatttgaaatacatggtattgccatctgctgggaaaactct
cctgtgtacttcatcaatcttcctaaggacctactgtggtctcataagcaaaggaatgat
tcaactcccagtcaatctggtgacaaaaataatgttcaaccacctgagaattggttggag
atagttcggaagagatggaacaagattggagaaataatgggaaagagaggtgtcctaaaa
tttacttggaatttgaaagttcaacttcaggtgctcaagggtgctgtagtttccattcag
agatttggctgcccgagttttccaaggaaaatatttggtcctgaactcatagacagttcg
cacttaacattatcccctattaacattaaagaagcaatcgacatgtgcattgtggcatgg
attctttggcctgatgaggagagaagctccaatccgaacttggagaaggaagtcaagaaa
aggttatcaagcgaggctgtggcagctgctaatcagaatggcaggtggaagaatcagatg
cgaagagttgctcataacggctgttgtcgccgcgttgcgcaaacaagagccctatgctct
ggtctttggaagttactgacttctgagggactctttgaagcactcaagaacattgaaatc
ccgctggtgaatgttcttgctgacatggagctttgggggattggtgttgacatggagggg
tgcctaaatgcacgcactgtgctggggaaaaggctaaggtatcttgagaagaaggcttat
aagctggctggcatgacattttcactgtacacagcagcagacattgcaaatattctatac
agacacttgaagcttcccattccagaaggacacgataaggggaaaaaacatcctagcact
gacaagcattgtttggatttgttaaggcatgagcatcctattgttccagtcatcagagag
cacaggacattagcaaagcttttaaactcaacactgggatcaatctgttcactggcaagg
ctatctatggagactcagaagtacacactacatggccattggctccaaacatcaacagct
actggccggctttcaattgaagaacctaatcttcagtgcgttgaacacgcagttgatttc
gaaatgagttcagataaagagggggatgatgctgaacctgagcattataaaataaatgcc
cgtgacttctttgttcctactcaggataactggctactgttaacagctgattattctcag
atagaattgcgactgatggcacatttctctaaagacactgcattaattaaactccttacc
aagccacatggcgatgttttcaacctaatagccgcacgatggactgggaagcctgaagct
tctctcagctcagttgagcgagatcagaccaaaaggatggtctatggaattctttatgga
atgggtgctaacactcttgctgaacaactggattgtagctctgatgaagctgcagaaaaa
attaaaagcttcaaaagttcttttcctggggttgcttcctggctccatgaagcagttgca
tcttgccgtgaaaaaggatatgtggagaccattaggggaagaaaacggttcttgtcgaaa
ataaaattcggaaatagtgaagaaaaatcaaaagctcagagacaagcagttaattctatc
tgtcagggatctgctgctgacttaatcaagattgcaatgataaatatacattctctgatt
gttgatggagttgataggccagagtctagctctttacatgcaaacaagtttcacatgctg
aagggccaatgccgaattctattacaggtacatgacgagctagtgctggaagttgatcca
tccttgatcaatgaagctgcattgctgttacaaatgagcatggaagatgctgcttctctt
cttgttcctttgcatgtcaaactaaaagttggaagaacctggggctctttaaagcctttt
cttgctgatcaacacataaatgaagttcttgtgcctgaatcatga

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