Populus alba (white poplar): 118051373
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Entry
118051373 CDS
T07314
Name
(RefSeq) protein transport protein SEC24 C isoform X1
KO
K14007
protein transport protein SEC24
Organism
palz
Populus alba (white poplar)
Pathway
palz04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
palz00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
118051373
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
palz04131
]
118051373
Membrane trafficking [BR:
palz04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
118051373
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec23_trunk
Sec23_BS
Sec23_helical
zf-Sec23_Sec24
Gelsolin
Sen15
Motif
Other DBs
NCBI-GeneID:
118051373
NCBI-ProteinID:
XP_034917878
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All DBs
Position
5:3574026..3588277
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AA seq
1075 aa
AA seq
DB search
MASNVPPGAPRQSPPPNYNPNYQQNPNILSDNFQNLNLNRPPSMASSAPRPSPFSQPSPF
PSLVPSPQFSRPGAPPIAAVPRPSVPPSGSPSTFSSNVAPGRPTGPPFSQPPPFGSRPPP
GSFQSYTSGGMVAGPVSGAQPVGARPSPAASSSSPPQNVPPSSSFGGLVSNGPPAPAFQS
APRFPPPVSAPQQQPMGPPPTMGVARSPPQSMRPLMGSSGFSGQPVAPFSAPPQGTPFYA
PPQGTPFSAQQGMTPPPIGSPFAPQMQPQSVAQPPPRMFGMPPLLPNQMTAISPVIGQTG
SPLSGASKIDPNQIPRPIPGSSVILHDTRSGNQANPPPPATSDYIVTDTGNCSPRYMRCT
INQIPCTVDLLSTSGMQLALLVQPLALPHPSEEAVQVVDFGESGPVRCSRCKGYINPFMK
FIDQGRRFICNLCGFTDETPRDYLCNLGPDGRRRDADERPELCRGTVEFVATKEFMVRDP
MPAVYFFLIDVSMHAMQTGATAAACSSISQVIADLPEGPRTMVGIATFDSTIHFYNMKRA
LQQPLMLIVPDIHDVYTPLQTDVIVPLSECRQHLELLLESIPTMFQNSRIAESSFSAAIK
AAFLAMKNTGGKLLVFQSVLPSVGVGALSAREAEGRSNISTGEKEAHKLLQPADKTLKEM
AIEFAEYQVCVDVFITTQTYVDIASISVIPKTTGGQVYYYYPFSAVSDPAKLYNDLRWNV
TRPQGFEAVMRVRCSQGIQIQEYHGNFCKRIPTDIDLAVIDCDKTIMVTLKHDDKLQDGT
ECAFQCALLYTTVYGQRRIRVANLSLSCTNNLSNLFRLADLDSQFVCFLKQAANEIPSNP
SLVVQEQVTNFCINILLSYRKFCATVSSSGQLILPEALKLLPLYTLALIKSTGLKVNGRI
DDRSFWISYVSSVSTPLAIPLVYPRMIAIHNLDSQEADGSCIPSALALSSEYVSEDGIYL
LENGQDGLIYIGNSVTSDTLQKLFGISSVAEIPTQYSQFVLEQYDNPLSKKLNNVVNEIR
RQRCSFLRLKLCKKGDSSGMSFFSYLVEDKVPAGGLSYVEFLVHIHRQIQVKMSS
NT seq
3228 nt
NT seq
+upstream
nt +downstream
nt
atggcttctaacgtgcctccaggggcacctagacaatccccaccacctaattataaccca
aattatcagcaaaacccgaatattttatctgataatttccagaatttgaatctcaatcgg
cccccttcaatggcatcttcagctccaaggccttcgccattcagccaaccatcaccattt
ccctccttagttccttcaccgcaattttccaggcctggtgcaccacctattgctgctgtt
cctagaccttcagtgcctccctctggatctccatccacattttcctcaaatgtggcccct
ggtagacctaccgggccacctttcagtcagccaccaccctttgggtccagaccacctcct
gggtcattccaatcctataccagtggtggtatggtagcgggtcctgtctctggtgcacag
ccagtaggtgctcgtccaagtcctgctgcatcatcttcttcgcctcctcagaatgtgccc
ccatcaagttcatttggtggtttagtaagtaatgggccaccagcccctgctttccagagc
gctccacgttttcctccccctgttagtgcaccacagcaacaacctatgggtcctccacca
acaatgggggtggctcgctcgccccctcaaagcatgcgccctttaatggggagttcaggg
tttagtggccaaccagttgctccattttctgcaccacctcaagggacaccattttatgca
ccacctcaagggacaccattttcagcacagcaagggatgacaccaccacctataggttct
ccttttgcaccacagatgcaaccacagtctgttgctcaacctccacctagaatgtttgga
atgccgccactactaccgaatcaaatgactgctatatcaccagttattggtcaaactgga
agtcctttatcaggggcatcaaagattgaccccaatcaaattccccggcccattccaggt
tcctctgtgatcctacatgatactcgttcaggaaatcaggccaacccaccaccgcctgct
acaagtgactacattgttacagacactgggaattgcagtccacgctacatgaggtgtacc
atcaatcagattccatgcacggttgatttgttatcaacatctggcatgcagttggctttg
ttggtccaacctctggcccttcctcatccatctgaggaggctgtccaggttgttgatttt
ggagaaagtggtcctgttcgctgttctcgttgcaaaggctacataaatccttttatgaaa
ttcattgatcaagggaggcgatttatatgcaatttgtgtgggttcactgatgagactccc
cgtgactacctctgcaatctaggtccagatggtagacgtagagatgctgatgaaaggccc
gagctatgcaggggaacagttgaatttgttgccacaaaagaattcatggttcgtgatccc
atgccggctgtgtatttcttcctaattgatgtatccatgcatgccatgcaaactggtgca
actgctgcagcttgcagctcaattagtcaagttattgctgatcttccagaagggccacgg
acaatggtgggcattgcaacatttgattcaacaatccatttttacaatatgaaacgggca
ttacaacagccactgatgcttattgtacctgatatacatgatgtttatactcctttgcaa
actgatgttattgttccgctttctgagtgccgtcaacatttggagctattattggaaagt
attccaactatgtttcagaatagtagaattgctgaatcatctttcagtgcagcaatcaag
gcagcattcttggcaatgaaaaatactggagggaagcttttggtatttcaatcagtctta
ccttctgttggtgttggagccctttctgctcgagaggctgagggaagaagtaacatctct
acaggggagaaggaggcccataaattactccaaccagctgacaaaactttgaaggaaatg
gccattgaatttgctgaatatcaggtctgtgttgatgtgttcatcactacccagacttat
gtggacattgcttctatctctgtcatacctaaaacaactggagggcaggtttattattac
tatcctttctctgctgtctctgatccagcaaagctgtacaatgatcttagatggaatgtc
acaaggcctcaaggttttgaggcagtgatgcgtgtgaggtgcagccagggcattcaaatt
caagaataccatggaaacttttgcaagcgcattccaacagatattgacctggctgtgatt
gattgtgacaaaactataatggtcacattaaaacatgatgataaattgcaggatggcaca
gaatgtgcttttcagtgtgccctcctctacaccactgtgtatggccaaagaagaattcgc
gttgcaaatttatcactgtcatgcacaaacaatttaagtaatttgtttcgcttggctgac
ttggattcccaatttgtgtgtttcttgaagcaagcggcaaacgaaatcccttccaaccca
tccttggttgtccaagaacaagtgacaaacttttgcataaacattctgctttcatatcgc
aaattttgtgcaacagtatcgtcatcaggacaactcatccttccagaggcacttaaactt
ctgcccctgtacacccttgcattaattaaaagtacagggttgaaagtcaatgggaggatt
gatgatcggtcattttggatcagttatgtttcctcagtttctacacctttagcgattccc
ttggtgtatcctaggatgattgcaattcacaaccttgattcacaggaagcagatggatct
tgtatcccttctgcactcgcgctttctagtgaatatgtgagtgaggatggaatttatctt
cttgagaatggccaggatggcttaatatatattgggaactcagttacttcagataccttg
caaaaactttttggcatttcctcggtagctgaaattccaactcagtattctcagtttgtt
ctggagcaatatgacaatccactatcaaagaaactaaataatgtggtgaatgagatacga
cggcaaagatgttctttcctgcgcttaaagttgtgtaaaaaaggagattcatcaggaatg
tcattcttctcatatttggttgaagacaaggttccagccggtggtctctcctatgtagaa
ttcctagtgcatatccatcggcaaattcaagtaaaaatgtcttcataa
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