Populus alba (white poplar): 118051623
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Entry
118051623 CDS
T07314
Name
(RefSeq) SNW/SKI-interacting protein A
KO
K06063
SNW domain-containing protein 1
Organism
palz
Populus alba (white poplar)
Pathway
palz03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
palz00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
118051623
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
palz03041
]
118051623
Spliceosome [BR:
palz03041
]
Complex B
Other components
Prp19-related factors
118051623
Complex C
118051623
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SKIP_SNW
Motif
Other DBs
NCBI-GeneID:
118051623
NCBI-ProteinID:
XP_034918201
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All DBs
Position
18:10397213..10399384
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AA seq
612 aa
AA seq
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MAALKELLPPVKSTSATYYDHSNDPWFKQRFSSSEVEQSAGGGGISYKPVPLYLQRKGFV
PRKVEDFGDGGAFPEIHVAQYPLDMGRNKSAKPGSKILALTVDAQGNVAYDAIVRQNENT
KKIVYSQHKDLIPKILRSEEQGDEDGDGDGDEELQKEIEDTTLETKAALEKIVNVRLSAA
QPKNVPKQSSDSKYIKYKPSQQSAAFNSGAKERIIRMVEMPVDPLEPPKFKHKRVPKASG
SPPVPVMHSPPRPVTVKDQQDWKIPPCISNWKNPKGYTIPLDKRLAADGRGLQDVQINDN
FAKLSEALYVAEQKAREAVAMRSKVQKEMMMKEKERKEQELRALAQKARSERTGAAPPPS
APVPSERGAMDDVDMRGDYEHVKDRERDAPKETREEREERLRREKIREERRRERERERRL
EAKDAAMGKKSKITRDRDRDISEKVALGMASTGAGKGGEVAYDQRLFNQEKGMDSGFAAD
DQYSVYDKGLFTAQPTLSTLYRPKKDVDAEMYGGSDEQLDKIMKTERFKPDKEFAGTSQR
TGPRDRPVEFEKDEEEADPFGLDQFLTEVKKGKKPTDKVGTGGTMRASAGSSMRDGHDGG
SGRTRIGFERGR
NT seq
1839 nt
NT seq
+upstream
nt +downstream
nt
atggcggctttaaaggaattactgcctccggtgaaatcaaccagcgcaacttattatgat
cattcaaatgatccgtggttcaagcagaggtttagttcatctgaggttgaacaatctgct
ggtggtggtgggatcagttataaacctgtacctctttacttgcagcggaaaggttttgtt
cccaggaaagttgaagattttggagatgggggtgcgtttccagagattcatgttgcgcag
taccctcttgatatgggtaggaataagtctgcgaaacctgggtccaagattttggctttg
actgttgatgctcaggggaatgttgcgtatgacgctattgtgagacagaatgagaatact
aagaagattgtgtattctcagcataaggatttgattccgaagattttgaggagtgaggaa
cagggagatgaggatggggatggggatggggatgaggaattgcagaaagagatcgaggac
actacgctggaaactaaagctgcgcttgaaaagattgtgaatgtcagattgagtgcagcg
cagccgaagaatgtgcccaaacagtcttcggattccaagtatataaagtacaagccttcg
cagcagtcggcagcgtttaactcgggtgcaaaagagaggattattagaatggtggagatg
ccggtggacccgcttgagccacctaagttcaagcataagagggttccaaaggcatcggga
tcaccacctgtgccagttatgcactcgccaccccgacctgtgactgtgaaggatcagcag
gattggaaaatcccaccttgtatctcaaattggaagaaccctaagggctacacgattcct
cttgataagcgtctggctgctgatggaagaggtttgcaggatgttcaaattaatgataat
tttgctaagctgtcagaagccctttatgttgctgagcaaaaggctagagaagccgttgct
atgagatccaaggttcaaaaggagatgatgatgaaggagaaggaaaggaaagagcaggag
ttgcgggcattagctcagaaagctcgttctgagagaactggtgctgcacccccaccgtct
gctccagtcccatcagagaggggtgcaatggatgatgttgacatgagaggggattatgag
catgtgaaggacagggagagggatgccccaaaggagacaagggaagagagggaagagagg
ctgcggcgtgagaaaattcgagaggagcgccgtcgagaaagggagagagaaagaagattg
gaagcaaaagatgctgcaatgggtaagaagagcaagatcactagagatagagatcgtgac
atcagcgagaaggttgctcttggtatggcctctactggagctggaaaagggggagaagtt
gcatatgatcaaaggttgttcaaccaagagaaaggaatggattctggttttgctgcagat
gatcaatacagtgtgtatgataaaggccttttcacggctcagcccacactttcaactcta
taccggccgaagaaagatgtcgatgctgaaatgtacggaggctcagatgagcagttagat
aagataatgaagacagaacgattcaaacctgacaaggaatttgctggtacttcacagagg
accggtccacgtgacaggccggttgagtttgagaaggatgaagaagaagctgatccattt
ggtctggatcagttcttgactgaagtaaagaagggcaagaaaccgacagacaaagttggt
actggtggcacaatgagagctagtgcaggatcttcaatgcgagatggccatgatggaggc
tctggtagaactcgtattggatttgagagagggcgttag
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