KEGG   Populus alba (white poplar): 118051690
Entry
118051690         CDS       T07314                                 
Name
(RefSeq) ras-related protein RHN1 isoform X1
  KO
K07887  Ras-related protein Rab-5A
Organism
palz  Populus alba (white poplar)
Pathway
palz04144  Endocytosis
palz04145  Phagosome
palz04148  Efferocytosis
Brite
KEGG Orthology (KO) [BR:palz00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    118051690
   04145 Phagosome
    118051690
   04148 Efferocytosis
    118051690
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:palz04131]
    118051690
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:palz04147]
    118051690
   04031 GTP-binding proteins [BR:palz04031]
    118051690
Membrane trafficking [BR:palz04131]
 Endocytosis
  Rab GTPases and associated proteins
   Rab GTPases
    118051690
 Endosome - Lysosome transport
    118051690
Exosome [BR:palz04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   118051690
  Exosomal proteins of other body fluids (saliva and urine)
   118051690
  Exosomal proteins of colorectal cancer cells
   118051690
  Exosomal proteins of bladder cancer cells
   118051690
GTP-binding proteins [BR:palz04031]
 Small (monomeric) G-proteins
  Rab Family
   Rab5/17/22/31 [OT]
    118051690
SSDB
Motif
Pfam: Ras Roc Arf GTP_EFTU Gtr1_RagA RsgA_GTPase TsaE AAA_24 MMR_HSR1 ATPase AAA_16 Imm63 SRPRB MMR_HSR1_Xtn PduV-EutP
Other DBs
NCBI-GeneID: 118051690
NCBI-ProteinID: XP_034918308
LinkDB
Position
18:9748922..9763747
AA seq 199 aa
MARTGSNNIQAKLVLLGDMGTGKTSLVLRFVKGQFLEFQESTIGAAFFTQVLSLNEATIK
FDIWDTAGQERYHSLAPMYYRGAAAAVVVYDITSMDSFERAKKWVIELQRQGNPNLIMFL
VGNKVDLKEKRKVGIEEGEQYAKENGMVFLETSAKTTQNVNELFYEIAKRLAKKAPSRPI
GMKLHRRPQETGRRMFCCS
NT seq 600 nt   +upstreamnt  +downstreamnt
atggcaaggacaggaagcaataacatacaggccaagctggtgctcctcggggacatgggg
accgggaagacaagtttggtactgaggtttgtcaaggggcaatttttggagttccaggaa
tcaacaattggagcggcctttttcactcaagttttgtcgttgaatgaagcaactattaag
tttgatatatgggacacagctgggcaggaacggtaccatagcttggcaccaatgtactat
cgcggtgcagctgcggccgttgtggtatacgatatcacaagcatggattcatttgaacga
gctaagaagtgggttattgaactgcagagacaaggaaatccgaatctgataatgttctta
gtaggcaacaaggttgacttgaaagagaagagaaaagttggcatcgaggaaggtgagcag
tatgctaaagaaaatggaatggtatttcttgaaacatctgcgaaaaccacccagaatgtg
aacgagctcttttacgaaatagctaagagattggccaaaaaagccccttcacgtccaatc
gggatgaaattgcataggagacctcaagaaactggaagaagaatgttttgttgctcctga

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