Populus alba (white poplar): 118051693
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Entry
118051693 CDS
T07314
Name
(RefSeq) uncharacterized protein
KO
K12586
exosome complex component RRP43
Organism
palz
Populus alba (white poplar)
Pathway
palz03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
palz00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
118051693
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
palz03019
]
118051693
Messenger RNA biogenesis [BR:
palz03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
118051693
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Phage_Gp23
Motif
Other DBs
NCBI-GeneID:
118051693
NCBI-ProteinID:
XP_034918321
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All DBs
Position
16:5194196..5198909
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AA seq
303 aa
AA seq
DB search
MGVPDASGDLSSEMEVDAFRHLFPLRYFERHLSESIRPDARPLGRARDTTLALGAVASAH
GSALAKIGSTTMLAAIKMEVMIPSTESPDEGCIAIDFHMPPICSPIVRPGRPAEAAPVIS
KQLSDTISSSGMINLKELSLVSGKAAWMAYLDIYCLDADGALFDAALLSAVAAFSHLQIP
IVSLNDDGKIVLVSEEDEGAKLEKEPVNKEKRKLKLSSIPFSLTCILHKNYILADPTAEE
ESIMETLVTVVLDSSARLVSFYKPGGSFLANTSAVQDCVALTRQRVKELQEILDEAISGM
EID
NT seq
912 nt
NT seq
+upstream
nt +downstream
nt
atgggggtgccagatgcctctggggacttgtcatcggagatggaggtggatgctttcaga
cacctcttccctcttcgctattttgagcgtcatctctcagaatctatacgcccagatgca
aggcctcttggaagagctagagatacaacattagcccttggggctgttgcatctgctcat
gggtcagcattggcaaagattggttcaactaccatgttggctgccataaaaatggaagtg
atgatcccttcaacagagtcaccagacgagggctgcatagctattgatttccacatgcct
ccaatttgttctccaattgttaggcctggtaggcctgctgaggcagcaccagtgatatca
aagcaattatctgataccatatcaagttctggcatgattaatctaaaggaactgtccttg
gtcagtggaaaagccgcctggatggcttacctggacatctattgtttggatgctgatggt
gctctttttgatgctgcactactttcagctgttgccgcattctctcatttgcaaatcccc
atagtttccttaaatgatgatggaaaaatagtacttgtatcggaggaagatgagggagca
aaattggagaaggagcctgtcaacaaggaaaagaggaagctcaaactaagcagcattcca
ttttcattaacatgcatacttcataaaaattacatcttggcagaccccactgcagaggaa
gagtccatcatggaaactcttgtaactgtggttttggattcatctgccagacttgtatct
ttttacaagccaggtggatcatttcttgccaatacatcagctgtccaggattgcgttgca
ttgacaaggcagagagtcaaggaacttcaagagattttagacgaggccatttctggtatg
gagatcgactaa
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