Populus alba (white poplar): 118051773
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Entry
118051773 CDS
T07314
Name
(RefSeq) polygalacturonase isoform X1
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
palz
Populus alba (white poplar)
Pathway
palz00040
Pentose and glucuronate interconversions
palz01100
Metabolic pathways
Module
palz_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
palz00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
118051773
Enzymes [BR:
palz01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
118051773
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Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
Beta_helix
NosD
Motif
Other DBs
NCBI-GeneID:
118051773
NCBI-ProteinID:
XP_034918387
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Position
16:5120480..5123698
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AA seq
516 aa
AA seq
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MLKDTQPSFLSFLSLYKYTKNIMTFSSLPYIPLKFHFPCNNLLLYLSDYQSSFLQEKKYL
VIMALQRALLYSFFIISISIISSYSCSQEDPLNNYLEEQASGYDSQAYPSYIDDGGFKDL
IKLRSDVLGLQTFSKERGSKSTPVITVGVKDFGVKDDGGDDTDDTETFERAWKEACSSPE
GAIIVVPEYTYRLKPIRFQGPCKSNIALQVHGTIEASCNQSDYKKDSRHWLLFDNVENLL
VEGGGTIDGNGKIWWENSCKVNKSLPCKEAPTAVTFFECQNLIVKDLKIQNSQQMHVSFK
KSNHVLVSNLTVTSPEESPNTDGIHITKTQNIQITDSVIGTGDDCISIVSGSHNVQAKGI
TCGPGHGISIGSLGAHDSKDHVSEVTVNGAKLSGTANGVRIKTWQGGSGNVSNIKFQNIE
MNKVTNPIIIDQNYCDQDKPCKQQKSALQVKNVVYKNIKGTSASEVAMRFDCSKAYPCQG
ILLQDINLERAGDRTAKALCNNVKLATLGVVYPKCS
NT seq
1551 nt
NT seq
+upstream
nt +downstream
nt
atgctcaaggacacacaaccatcatttctctctttcctttctctctataaatatacgaaa
aacatcatgacattttcttcacttccatatatacctctaaaatttcatttcccatgtaac
aatcttctgctatacctttcagattatcaatcctctttcttgcaagagaagaaatatcta
gttataatggccttacaaagggcacttctttactcattcttcataatctccatctccatt
atttcttcctatagttgttcgcaggaggacccacttaataattaccttgaagaacaagca
tctggctatgattctcaagcttatccttcgtatattgacgatggcgggtttaaggactta
attaagctacgaagtgatgttttaggtttgcagacgtttagcaaagagaggggtagcaaa
tcaactcctgttataacagttggtgtgaaggactttggagttaaagatgatggaggagat
gatacagatgacacagagacatttgaaagggcttggaaggaagcttgttcttcccctgaa
ggtgctattattgttgtgcccgagtacacttatcgtcttaaaccgattagattccagggt
ccttgcaaatctaatattgcattgcaggtacatggaaccattgaagcatcttgtaatcaa
tcggactacaaaaaggatagtagacattggcttctctttgataatgttgagaatttacta
gttgaaggtggtggaactatcgatggaaatgggaagatatggtgggaaaactcgtgcaaa
gtcaataaatctcttccttgcaaagaggcacctacggctgtcaccttctttgaatgccag
aatttgattgtgaaggacctcaaaatccaaaattcacagcaaatgcatgtttctttcaag
aaaagcaatcatgttctagtatccaacctcacagtaacctcaccagaagagagccctaac
accgacgggatccatatcacaaagactcaaaacatccagattactgattcagtcatagga
acaggtgatgattgtatatccattgttagtggatcacataatgtgcaagccaagggcata
acttgtggaccgggtcatggaatcagtattggaagcttaggagcacatgattcaaaagac
catgtttcagaagttactgtcaatggtgccaagctttctggtaccgcaaatggtgttagg
atcaaaacatggcagggagggtctgggaatgtaagcaacatcaagtttcagaatattgaa
atgaacaaggtcaccaaccccattataatagatcaaaactattgtgaccaggataaacca
tgcaaacaacagaagtcagcacttcaagtgaaaaatgtggtgtacaagaacattaagggg
actagcgcttctgaagtggctatgagatttgattgcagcaaggcttatccatgtcaaggg
attctattacaagatattaatctcgaaagagcaggagatagaacggccaaagctttgtgc
aacaatgttaaattagctacgttgggagttgtttatccaaaatgttcttga
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