Populus alba (white poplar): 118052025
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Entry
118052025 CDS
T07314
Name
(RefSeq) LOW QUALITY PROTEIN: heparanase-like protein 3
KO
K07964
heparanase [EC:
3.2.1.166
]
Organism
palz
Populus alba (white poplar)
Pathway
palz00531
Glycosaminoglycan degradation
palz01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
palz00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00531 Glycosaminoglycan degradation
118052025
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
palz00536
]
118052025
Enzymes [BR:
palz01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.166 heparanase
118052025
Glycosaminoglycan binding proteins [BR:
palz00536
]
Heparan sulfate / Heparin
Enzymes
118052025
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_79n
Minor_capsid_1
Motif
Other DBs
NCBI-GeneID:
118052025
NCBI-ProteinID:
XP_073262304
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Position
18:13520602..13523666
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AA seq
547 aa
AA seq
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MIYLQNWQMGLCLLVCIISCCFISVSSQSAVAGNDNNSVVEGTVFIDGKYSIGKIDENSI
CATLDWWPPEKCDYGTCSWDHASLINLDLNNSILLNAIKAFSPLKIRIGGTLQDKVIYDT
EDNKQPCVQFVKNTREMFGFTQGCLPMHRWDELNAFFKKSGAEIIFGLNALTGRSXKSDG
SAVGAWNYSNAESFISYTVKKNYSIYGWELGNELCGSGVGTRVTAAQYASDTISLYNIVK
KTYSSIEPKPLVIAPGGFYDANWFKEFVDKTGNSVDAITHHIYNLGPGVDTHLIEKILNP
SYLDGEARTFNSLQSTLKSSATSAVAWVGESGGAYNSGHNLVTNAFVFSFWYLDQLGMAS
SYDTKTYCRQSLIGGNYGLLNTTTFVPNPDYYSALLWHRLMGRNVLSTSFSGTKKIRAYT
HCAKQSKGITLLLINLDSSTTVEVNVKLNSTLGLHRKHKTHRSHETKAVRLLEGSTSEIT
REEYHLTAKDGDLHSRIMLLNGNILTVNSSGDIPSFEPLLVNSSKPIMVAPFSIVFVQMS
YVLPACS
NT seq
1644 nt
NT seq
+upstream
nt +downstream
nt
atgatttatttgcagaactggcaaatggggctgtgcttactggtctgtatcattagctgt
tgcttcatttctgtgagttcacaaagtgctgtagctggaaatgataataacagtgttgtt
gaaggaactgttttcatagatggaaaatattccattggaaagattgatgaaaattccatt
tgtgccaccttagattggtggccacctgagaaatgtgattatgggacatgcagctgggat
catgcttctctcattaatctggatcttaacaacagcatcttgttaaatgccataaaggct
ttttcgcctttgaaaatcagaatagggggcactttgcaagataaggtcatttatgacacc
gaagataataagcaaccttgtgtccaatttgtcaaaaacaccagggagatgtttggtttc
acgcagggttgcttaccaatgcatagatgggatgaacttaatgcctttttcaagaaatct
ggggctgaaattatatttgggttaaatgctctcactggccggtcantgaaatctgatggt
tctgcagtaggagcttggaactactctaatgcagaatcatttataagctatactgtcaag
aagaactactctatttatggctgggagctcggaaatgaattatgtgggagtggtgttgga
acaagagttacagcagctcagtatgcttctgatacaatttccctgtataacatagtgaaa
aagacttacagcagcattgaaccgaaaccgctagttatagcacctggaggattctatgat
gcaaattggttcaaagagtttgtagataaaacaggcaattctgtagatgcgatcacccac
cacatatacaatcttggtccaggagttgatacacatctcattgaaaagatccttaatcca
tcctatcttgatggtgaggctaggaccttcaatagcctccaaagcactctcaagagttct
gcaacttcagcagttgcatgggttggtgaatcaggaggggcttacaacagtggccataac
cttgttaccaatgcattcgtgtttagcttctggtatttggatcagcttgggatggcatca
tcttatgatacaaaaacgtactgcagacagtcattgattggcggcaattatggtttactc
aacactactacttttgttccaaatccagattactacagtgctcttctttggcaccgctta
atgggaagaaatgttctatcaaccagcttttctggaacgaaaaaaatacgtgcatatact
cattgcgcaaaacaatctaaagggatcacattactactaatcaaccttgacagtagcacg
actgttgaagtcaatgtaaaactcaacagcactttgggattgcaccgtaaacacaagact
cacaggtctcatgaaacaaaggccgttcgactgcttgaaggatccacaagtgagataaca
agagaagaataccatctaacagcaaaagacggagatttacacagccgaataatgctactc
aatgggaacattttaacagtaaattcatccggggacataccttccttcgagccactactt
gtaaattcatcaaagccgataatggttgctcctttctctattgtattcgttcaaatgtca
tatgtactccctgcttgcagttag
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