Populus alba (white poplar): 118052280
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Entry
118052280 CDS
T07314
Name
(RefSeq) protein FIZZY-RELATED 3
KO
K03364
cell division cycle 20-like protein 1, cofactor of APC complex
Organism
palz
Populus alba (white poplar)
Pathway
palz04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
palz00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
118052280
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
palz04121
]
118052280
Ubiquitin system [BR:
palz04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
APC/C
Target recognizing subunit
118052280
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_CDC20-Fz
Beta-prop_THOC3
Beta-prop_WDR3_1st
Beta-prop_WDR5
WD40
Beta-prop_EML_2
WD40_WDHD1_1st
WD40_Prp19
Beta-prop_WDR19_1st
Beta-prop_WDR3_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_2nd
Beta-prop_WDR36-Utp21_2nd
WD40_Gbeta
EIF3I
Beta-prop_EML
WD40_MABP1-WDR62_2nd
ANAPC4_WD40
Beta-prop_Aladin
Beta-prop_IFT140_1st
WDR55
WD40_MABP1-WDR62_1st
Beta-prop_WDR36-Utp21_1st
Beta-prop_RIG_2nd
Beta-prop_WDR90_POC16_2nd
eIF2A
Beta-prop_IFT122_1st
Beta-prop_RIG_1st
Beta-prop_WDR41
Beta-prop_HPS5
NBCH_WD40
WDR90_beta-prop_4th
Beta-prop_DCAF4
Beta-prop_SPT8
MIOS_WD40
Aldo_ket_red
Motif
Other DBs
NCBI-GeneID:
118052280
NCBI-ProteinID:
XP_034919090
LinkDB
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Position
8:complement(3514666..3518475)
Genome browser
AA seq
485 aa
AA seq
DB search
MDSTPRRKSGLNLPSGMNETSLRLETLSSSSSFRAVTCVSSPRAISSLSSPSKTSSCSDR
FIPCRSSSRLHTFGLVEKGSPVKEGGNEAYARLLKSELFGSDFGSFSSPAGGQGGLSSPN
KNMLRFKTDHSGPNSPFSPSILGHDSGISSESSTPPKPPRKVPKTPHKVLDAPSLQDDFY
LNLVDWSSQNVLAVGLGTCVYLWTASNSKVTRLCDLGPNDSVCSVQWTREGSYISVGTHL
GQVQVWDGTQCKRVRTMGGHQTRTGVLAWNSRTLASGSRDRHILQHDLRISSDYVSKLVG
HKSEVCGLKWSHDDRELASGGNDNQLLVWNQHSQLPILKLTEHTAAVKAIAWSPHQSGLL
ASGGGTADRCIRFWNTTNGHQLNHVDTGSQVCNLAWSKNVNELVSTHGYSQNQIMVWKYP
SLSKVATLVGHSLRVLYLAMSPDGQTIVTGAGDETLRFWNVFPSMKTQTPVKDTGLWSLG
RTQIR
NT seq
1458 nt
NT seq
+upstream
nt +downstream
nt
atggattcaacaccaagaagaaagagtggcctgaacctcccatctgggatgaatgagact
tctttaagactagagaccctttcctcttccagttcttttagagcagtaacatgcgtatca
tcacccagagcaatatcaagcttatcttcaccctcgaaaacctcatcttgtagtgataga
ttcataccttgcagatcatcttcaaggctccacacttttggactcgtagagaaaggatct
cctgttaaagaaggaggcaacgaagcttatgcaaggttattgaaatctgagcttttcggg
tctgattttggttccttttcttctcctgcaggtggtcaaggagggttgagtagtcctaac
aagaatatgttgaggttcaagactgatcattcggggcctaattcgccgttttctccttca
atcttgggacacgatagtgggatttctagtgagtcttctactcctcctaagccaccaaga
aaagtccccaaaacacctcataaggttttggatgccccgtcacttcaagacgacttctat
ctgaatcttgtggattggtcctcgcagaatgtactcgctgttgggttgggaacttgtgtc
tatttatggaccgcatcaaatagtaaagtgaccaggttgtgtgatttagggcctaatgac
agtgtatgctctgtgcaatggacccgggaaggctcatacatatcagttggtacacatctt
ggtcaagttcaggtgtgggatggaacacagtgcaagagggtccgaaccatgggagggcat
caaacaagaacaggtgtcttggcttggaactctaggacactagcatcaggaagcagggac
cgccatatacttcagcatgatcttcgaatttccagtgactatgtcagcaaacttgttggt
cacaaatctgaggtatgtggcttaaaatggtcacatgatgacagggaacttgcatctggt
ggaaatgataatcagctcttggtatggaatcagcactcccagctaccaattttgaaactg
actgaacacacagctgcagtcaaggccattgcttggtcaccccaccagagtggccttctt
gcatctggaggtggaactgctgatagatgtattcgcttttggaacaccaccaatggtcat
caattaaaccatgttgacacaggaagccaggtgtgcaatctagcttggagcaagaacgtt
aatgagctggttagcactcatgggtactcccagaatcaaattatggtgtggaaatatcca
tcattatccaaggttgcaactctagttggtcacagtttgcgagtactctatcttgccatg
tctcctgatggtcagacaatagtaactggagcaggggatgagacattgcggttttggaac
gtcttcccctctatgaaaacacagacaccagtgaaagatacaggcctttggtcattagga
cgaacccagattcggtga
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integrated database retrieval system