Populus alba (white poplar): 118052655
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Entry
118052655 CDS
T07314
Name
(RefSeq) chromatin-remodeling ATPase INO80
KO
K11665
chromatin-remodeling ATPase INO80 [EC:5.6.2.-]
Organism
palz
Populus alba (white poplar)
Pathway
palz03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
palz00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
118052655
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
palz03036
]
118052655
Chromosome and associated proteins [BR:
palz03036
]
Eukaryotic type
Chromatin remodeling factors
INO80 complex
118052655
INO80 complex (yeast)
118052655
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
DBINO
Helicase_C
ResIII
DEAD
HDA2-3
Motif
Other DBs
NCBI-GeneID:
118052655
NCBI-ProteinID:
XP_034919552
LinkDB
All DBs
Position
16:complement(4243700..4254285)
Genome browser
AA seq
1530 aa
AA seq
DB search
MDNRRQAKDSLSYSNLFNLESLVNFRVPQPDDEFDYYGNSSQDESRGSQGGAMSNFVNGN
LSERELSSGKRNRRYNNSEGEEEDGYSGARITEEQYRSMLGEHIQKYKRRYKDSLSNPAP
PPRMGIPVPKSSLGGSKTRKLGSEQRGGLYDMETTSEWVNDIVPSKHGDYHEPEFTPKIY
YEPPYLDIGDGVTYRIPLSYDKLAASLNLPSFSDMRVEEFYLKGTLDLGSLAAMTANDKR
FGLRSRAGMGEPQLQYESLQGRLKALAASNSAEKFSLKISEEALNSAIPEGAAGNIKRSI
LSEGGVMQVYYVKVLEKGDTYEIIERSLPKKPKIIKDPSVIEREEMERIGKVWVNIVRRD
IPKHHRIFTTSHRKQLIDAKRFSENCQREVKLKVSRSLKIMKGAAIRTRKLARDMLLFWK
RVDKEMAEVRKKEEREAAEALKREQELREAKRQQQRLNFLIQQTELFSHFMSNKPNSQPS
EALPIADEKTDDQVMDFSTAEAGPDPEEDPEDAELRKEALKAAQDAVSKQKLLTSAFDTE
CSKLREVADIEGPITDASVAGSSNIDLQTPSTMPVTSTVKTPELFKGSLKEYQLKGLQWL
VNCYEQGLNGILADEMGLGKTIQAMAFLAHLAEEKNIWGPFLVVAPASVLNNWADEISRF
CPDLKTLPYWGGLQERMVLRKNINPKRLYRREAGFHILITSYQLLVSDEKYFRRVKWQYM
VLDEAQAIKSANSIRWKTLLSFNCRNRLLLTGTPIQNNMAELWALLHFIMPTLFDSHEQF
NEWFSKGIENHAEHGGTLNEHQLNRLHAILKPFMLRRVKKDVVSELTRKTEVTVHCKLSS
RQQAFYQAIKNKISLAELFDSNRGHLNEKKIMNLMNIVIQLRKVCNHPELFERNEGITYF
YFGEIPNSFLPSPFGELEDIHYSGGRNPITYKIPKAVHNEIVQSSEVLCSAIGRGFGRES
FQKHFNIFSSENVYRSVFALDNSSDSLLMKSGAFGFSHLMDLSPAEVAFLAISSFMERLL
FSIMRWGRRFLDGIIDLLMKDIENDHSNYLEKHKVRAVTRMLLMPSRSETDILRRKIATG
PADTPFEALVNSHQDRLLSNIKLLHSTYTFIPRTRAPPIGGQCSDRNFAYQMMEELHQPM
VKRLLTGFARTSTFNGPRKPEPPHPLIQEIDSELPVSQPALQLTYKIFGSCPPMQSFDPA
KLLTDSGKLQTLDILLKRLRAENHRVLLFAQMTKMLNILEDYMNYRKYRYLRLDGSSTIM
DRRDMVRDFQLRNDIFVFLLSTRAGGLGINLTAADTVIFYESDWNPTLDLQAMDRAHRLG
QTKDVTVYRLICKETVEEKILQRASQKNTVQQLVMTGGHVQDDLLAPEDVVSLLLDDAQL
EQKLREIPLQARDRQKKKPTKAIRVDAEGDATFEDLTETVAQGTGNEQSEDAGELKPPNS
NKRKAASDKQITSKPRNSQKNEPNSTPMDYELDDPFPNSEPQSQRPKRLKRPKKSVNEKL
EPAFTATPSIDSSQIQYPPTNNLASTYSNT
NT seq
4593 nt
NT seq
+upstream
nt +downstream
nt
atggacaacaggagacaggccaaggactcgctttcttactccaatttgttcaatcttgag
tctttggtgaacttcagagttccacaaccagatgatgaatttgattattatgggaatagt
agtcaggatgagagcagaggtagccaaggtggagcaatgtcaaattttgttaatgggaat
ctatcggagagggaattgagttcagggaagagaaataggcggtacaacaacagtgaggga
gaggaggaagacggatattcgggggcacgcattactgaggaacaatatcgctcaatgtta
ggagaacatatccagaagtacaagaggaggtataaggattccttgtcaaatcctgcacct
cctcctcggatggggattcctgttccgaagagcagtttgggtggttctaaaaccaggaag
ctgggaagtgagcagcgagggggtttatatgatatggagaccacatctgaatgggtcaat
gacattgtaccatcaaaacacggagactatcatgaaccagagttcacgcccaaaatatac
tatgaacctccttatttggatattggggatggtgtcacttataggatacccctctcttat
gataagctggcggcatcattgaacttaccaagcttctcagatatgcgggtggaggaattt
tacttgaagggcaccttagatttgggttccttggcggcaatgacagccaatgataaaagg
tttggacttagaagccgagcggggatgggagagccccagttacaatatgagtcacttcag
ggaaggttgaaggcattggcagcttctaactctgctgagaaattcagtctcaagatatct
gaagaggcattgaattctgcaatcccagagggggcagctggaaatataaaacgctctatt
ttgtcagagggtggtgtaatgcaggtttactatgttaaagttttggagaaaggagacaca
tatgagattattgagcggagtctacctaagaagccaaaaataattaaagacccttctgtt
attgagagggaggaaatggaaaggattggtaaagtttgggtaaacattgtgagaagagat
atacctaagcatcataggattttcactacatctcatcggaagcaactaattgatgcaaag
aggttctcagaaaactgtcaaagagaggtcaaattgaaggttagcagatcactcaaaata
atgaagggtgctgcaattcgcactaggaagttagctagagacatgttactgttttggaag
cgagtggataaggagatggcagaggtgaggaaaaaggaggaaagagaagctgcagaagct
ttgaagcgtgaacaagagctcagggaagcaaaaagacagcagcaaaggctcaattttctc
atacaacaaacagaattgttcagtcatttcatgtcaaacaaaccaaattcacagccgtca
gaagctttgccaattgcagatgaaaagacagatgatcaagtaatggattttagcactgct
gaagctggacctgatcctgaagaagatcctgaggatgctgaattgagaaaagaggctctc
aaagctgctcaagatgcagtctccaagcagaaactgttgacaagtgcttttgatactgag
tgttcaaagctgcgtgaagttgctgatatcgagggacctataactgatgcctcagttgca
ggatctagcaatattgatttgcagacaccctccaccatgcctgttacatcaacagttaag
acaccagagttgtttaaaggcagccttaaagaatatcagttgaagggtcttcagtggctg
gttaattgttatgagcagggcttaaatggtatactggctgatgagatgggccttggaaag
actattcaagccatggcattcttggctcatttggctgaggaaaaaaatatctggggtcct
tttctggttgttgctcctgcttctgtcttgaataactgggctgatgaaatcagtcgtttc
tgccctgacttgaaaacccttccatattggggtgggcttcaagagcggatggtacttcgg
aaaaacattaatccaaaacgcctttatcgaagggaggctggttttcacattctcattacc
agctatcaattgctagtgtccgatgagaagtattttcggcgtgtgaaatggcaatatatg
gtactagatgaggcccaggctattaaaagtgccaacagtataagatggaagacactgctc
agttttaattgtcgtaatcgcctactgctgactggtacaccaattcagaataacatggca
gaattgtgggccctcctacatttcatcatgcccacattatttgacagccacgaacagttc
aatgagtggttttctaaaggaattgagaatcatgcagaacatggaggtactttaaatgag
caccagctaaacagattgcatgcaattctgaagccttttatgctgcgacgtgtgaagaaa
gatgtggtttctgagttaactaggaaaacagaagttactgtacactgcaagttgagctct
cgacaacaagctttctatcaagctattaagaacaagatatctcttgctgagttgtttgat
agcaatcgtggacatcttaatgagaagaaaattatgaatctcatgaacatagtcattcag
ctgagaaaggtttgtaaccatccagagttgtttgaaaggaatgagggaatcacatatttc
tattttggagagattcctaattctttcctgccctctccttttggggagttggaggacata
cattattcaggaggtcgaaatcctattacatataagattccaaaagcagtccacaatgag
attgtccaaagttctgaggtactttgctcagcaattgggcgtggttttggcagagagtca
tttcaaaagcattttaatatattctcatcagaaaatgtgtatcgatctgtatttgcactg
gacaatagctcagatagcttgcttatgaagagtggggcgtttggtttttctcatttgatg
gatttatccccagcagaggttgcatttttggcaattagttcatttatggagaggctgttg
ttttctattatgagatggggccgtcgatttttggatggaatcatagacttgctcatgaaa
gacatagaaaatgaccatagcaattaccttgaaaaacataaagtaagagctgttacacgg
atgttattgatgccatcaagatctgagacagatatcctaaggaggaaaattgcaacaggc
cctgctgatactccatttgaagctttagttaattctcatcaggacaggcttctgtccaac
atcaaacttctacactcaacttacacgttcatcccacggaccagagcaccaccgattggt
ggccaatgctcagatagaaactttgcctaccaaatgatggaagaattacaccaacccatg
gttaagaggttgttaactgggtttgctcgcacatccacatttaatggacctagaaagcca
gagcctcctcatcctttgattcaggagattgattctgaactacctgtttcacaacctgcc
cttcagttgacatacaagatttttggttcttgcccccccatgcaaagctttgaccctgca
aagttgctcacggattctggaaagcttcaaacacttgatatattactgaaacgattgcga
gcagaaaaccaccgagttctattgtttgctcaaatgacaaaaatgctgaatattctcgag
gactacatgaattataggaaatatagatatcttagacttgatggatcttccaccattatg
gatcgtcgggacatggtcagagacttccagcttaggaatgatatttttgttttcttgcta
agtaccagagctggtgggttgggtattaatttgacagctgcagacactgttatcttttat
gaaagcgattggaatcctacactagatttacaggcaatggatagagcacatcggctgggc
cagacgaaggatgtcactgtctaccggctcatttgtaaagagacagttgaggaaaagatt
ttacaaagagcaagtcagaaaaataccgtgcagcagcttgttatgacaggtggtcatgtt
caggatgatctcttggctcctgaggatgtggtgtccttgcttctggatgatgcccagctg
gagcagaagttgagagaaattccactgcaggccagggatagacaaaagaaaaaaccaaca
aaggcaataagggtagatgctgaaggggatgcaactttcgaagatttgacagaaactgtt
gctcagggcacgggaaatgaacaatccgaggatgcaggggaattgaaaccacccaatagc
aataagaggaaagctgcttctgacaagcagattacatcaaagccaaggaattcacagaag
aatgaaccaaattctacaccgatggactatgaactggatgatccttttccaaattctgag
ccacagtcacagagacccaagcggttgaagaggccaaagaagagtgtaaatgagaaactc
gaacctgcatttactgccacaccctcgatcgattcatcacagatccaatatccacctaca
aataatcttgcttcaacgtattcaaacacttga
DBGET
integrated database retrieval system
