Populus alba (white poplar): 118052678
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Entry
118052678 CDS
T07314
Name
(RefSeq) vacuolar protein sorting-associated protein 35B isoform X1
KO
K18468
vacuolar protein sorting-associated protein 35
Organism
palz
Populus alba (white poplar)
Pathway
palz04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
palz00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
118052678
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
palz04131
]
118052678
Membrane trafficking [BR:
palz04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Retromer subcomplex
118052678
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps35
Motif
Other DBs
NCBI-GeneID:
118052678
NCBI-ProteinID:
XP_034919572
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All DBs
Position
2:1368711..1375385
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AA seq
790 aa
AA seq
DB search
MILAGIEDEDKWLAEGIAGIQHNAFYMHRALDANNLRDALKCSALMLSELRTSKLSPHKY
YDLYMRAFDELRKLEMFFKDESRHGVSIVDLYELVQHAGNILPRLYLLCTVGSVYIKSKE
APAKDVLKDLVEMCRGVQHPVRGLFLRSYLAQASRDKLLDLGSKYEGAEDTVMDAVEFVL
QNFTEMNKLWVRMQHQGPVWVKEKLEKERSELRDLVGKNLHVLSQIEGVDLAIYRDTVLP
RVLEQVVNCKDELAQYYLMDCIIQVFPDEYHLQTLETLLGACPQLQPTVDVKTVLSRLMA
RLSNYAASSVDVLPEFLQVEAFAKLSSAIGKVIEAQVDMPIVGAVALYVSLLTFTLHVHP
ERLDYVDHVLGACVKKLSGKPKLEDIRAKKQIVALLSAPLEKYNDIVTALTLSNYPHVMD
CLDYETNKVMAMVIIQSAMKNNTRISTADKVEVLFELIKGLIKDLDETATDELDEEDFKE
EQNYVARLIHMLYNDDSEEMLKIICAVRKHIMAGGSQRLPFTVPPLIFSALRLVRKLQDQ
DGNVVGEEEPATPKKVFQLLNETIEALSSVSSPELALRLYLQCAEAANDCDLEPVAYEFF
TQAFILYEEEVADSKAQVTALHLIIGALQRMNVFGVENRDTLTHKATGHSAKLLKKPDQC
RAVYACSHLFWVDDQDGIKDGERVLLCLKRALRIANAAQQIANATRGCSGPVSLFVEILN
KYLYFFEKGSPQITSAAIQGLIELITNEMQSDSTTPDPASDAFFASTIRYIQFQKQKGGV
MGEKFGPIKV
NT seq
2373 nt
NT seq
+upstream
nt +downstream
nt
atgatcttagccggaatagaagacgaagacaaatggctagcagaaggaattgccggcatt
caacacaacgccttttacatgcatcgcgctctggacgcgaacaatctccgagacgctctc
aaatgttcagctctaatgctatcagagcttcgaacttctaaactctctcctcacaaatac
tacgatctctatatgagagcgtttgatgaattgaggaaactagagatgtttttcaaagac
gagagtagacatggcgtttcgattgttgatttatacgaacttgtgcaacatgctggaaat
atattgcctagactgtatctactgtgtacagtaggatcggtgtatatcaaatcgaaggag
gctccggctaaggatgtgctcaaggatcttgtagagatgtgtcgcggtgttcaacatccg
gttcgcggattgtttttgaggagttatcttgcccaagctagtagagataagttactggac
cttgggtctaagtatgaaggagctgaggacacagtaatggatgctgtagaatttgtgctg
caaaatttcactgagatgaataagctttgggtccggatgcagcatcaggggcctgtttgg
gttaaagagaagctggaaaaggaaagaagcgaacttcgtgatcttgtagggaagaacctc
catgttcttagtcagatagagggtgtggaccttgcgatttacagagacaccgttcttccc
agagttttagagcaggttgtcaactgtaaagatgagcttgcacagtattatttaatggac
tgcataattcaagtctttccagatgagtaccacttgcagacccttgagacattgttgggg
gcctgcccccagcttcagccaacagttgacgttaagacagtgctatcacggttaatggca
agattatccaattatgctgcttcaagtgtggacgttttacctgagttcctgcaagtggag
gcatttgctaaattgagcagtgctattggaaaggtaattgaagcacaggttgacatgcct
attgttggagccgttgctttgtatgtgtctctcctcacatttacactccatgtgcatcct
gaacggcttgattatgtggatcatgtactgggggcatgtgttaagaagctctctggaaag
ccaaaacttgaagatatcagagcaaaaaaacaaattgttgcacttctgagtgctccatta
gaaaagtacaacgatattgtcactgccttgacactgtctaattaccctcatgtcatggac
tgccttgattatgaaacaaacaaagtcatggctatggttattattcagagcgctatgaaa
aataacactcgcatttctactgctgacaaggttgaggtgttgtttgaactaataaaaggg
ctaataaaggatttggatgagactgctacagatgagctcgatgaggaggatttcaaggaa
gaacaaaattatgttgctcgcctcatacatatgctttataatgatgattcagaggaaatg
ttgaagattatatgtgctgtgaggaagcatataatggctggaggatcgcaacgattacct
tttactgttccgcctctcatattttctgcactcaggttggtgagaaagttgcaagatcag
gatggaaatgtagtgggagaagaagagcctgcaacgcctaagaaagtttttcagctcctg
aatgagacaatcgaggctctttcatctgtttcctcacctgagctggcattaaggttatac
ttgcaatgtgctgaggctgccaatgactgtgatcttgagccagttgcttatgagtttttt
acacaggcattcatattatatgaggaagaagttgcggactccaaggctcaggtgactgca
ttacatctaataattggggctctccagaggatgaatgtatttggtgttgagaacagggac
actctgacacacaaggccacgggacattctgcaaagcttttgaagaaacctgatcaatgc
agagcagtctacgcatgctcacatctattttgggttgatgatcaggatggcatcaaggat
ggggaaagggtcctgctttgcctcaagcgtgccttgaggattgcaaatgcagctcagcag
attgccaatgcaacaaggggttgcagtggaccagtctcactgtttgttgagatattaaac
aagtacctgtacttttttgagaaaggaagcccgcagattactagtgctgcaatacaagga
ctgatcgaattaattactaatgaaatgcaaagtgactccaccacaccagatccagcatca
gatgccttctttgccagcacaattcggtatattcagttccagaaacaaaagggcggtgtt
atgggtgagaaatttgggcctatcaaggtgtaa
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