Populus alba (white poplar): 118052818
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Entry
118052818 CDS
T07314
Name
(RefSeq) serine/threonine protein phosphatase 2A regulatory subunit B''alpha isoform X1
KO
K11583
serine/threonine-protein phosphatase 2A regulatory subunit B''
Organism
palz
Populus alba (white poplar)
Pathway
palz03015
mRNA surveillance pathway
palz04382
Cornified envelope formation
Brite
KEGG Orthology (KO) [BR:
palz00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
118052818
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
118052818
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
palz01009
]
118052818
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
palz03019
]
118052818
03036 Chromosome and associated proteins [BR:
palz03036
]
118052818
Protein phosphatases and associated proteins [BR:
palz01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
118052818
Messenger RNA biogenesis [BR:
palz03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
118052818
Chromosome and associated proteins [BR:
palz03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
118052818
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EF-hand_13
EF-hand_7
EF-hand_6
EF-hand_1
EF-hand_5
P2R3B_EF-hand
DUF4187
Motif
Other DBs
NCBI-GeneID:
118052818
NCBI-ProteinID:
XP_034919782
LinkDB
All DBs
Position
2:complement(2494536..2501934)
Genome browser
AA seq
541 aa
AA seq
DB search
MDIDRVAGEEVCCLDAELLQLPEVSSSVLKENPQLAEDLFSQWISLSDTSRLVKTLIDDA
KAGNPINIPGSSTNASAGGVNSLPSMFPAGSAPPISPRSSSGSPCTSKQKTSPSSLGSPL
KLVREPVREVIPQFYFQNGRPAASELKENCLSRINHLFRNDLDGLLIDEFKPVTKIVCKL
PSFFSYALFRKIDVDCTGIVTRDAFVKYWVDSNMLTLDVATQIFNILKQPDCKYLTQSDF
KPILRELLATHSGLEFLQNTPEFQERYAETVIYRIFYYINRSGNGCLTLRELKRGNLIDA
MNHADEEDDINKVIRYFSYEHFYVIYCKFWELDTDHDFLIDKENLVRYGNHALTYRIVDR
IFSQVPRKFTSNVEGKMCYEDFVYFMLSEEDKSSEPSLEYWFKCLDLDGNGVLTPNELQY
FYEEQLHRIECMAQEPVLFEDILCQIVDMIAPEREDYITLRDLKGCKLSGNVFNILFNLN
KFVAFESRDPFLIRQEREEPTLTEWDRFAHREYIRLSMEEDVEDVSNGSAEVWDESFEAP
F
NT seq
1626 nt
NT seq
+upstream
nt +downstream
nt
atggatattgatagagtagcaggagaagaagtttgttgtttggacgctgaactgctacag
ctaccagaagtttcttcttctgtgcttaaagaaaatcctcaacttgccgaggacttgttc
tctcagtggatttcgctttctgacacctcccgactggtgaaaactttgattgatgatgca
aaagctggcaatcccatcaacatacccggtagctctactaatgcgagtgctggtggggtc
aattcattaccttctatgtttcctgctggtagcgcacctccaatttcaccaagaagttca
tctggttctccatgcacgtctaagcagaaaactagcccttcttctctaggttccccgtta
aaattagtcagggaacctgtacgggaagttatacctcagttttattttcaaaatggtcgt
ccagcagcaagtgaactcaaagaaaattgtctttctagaattaatcatcttttcagaaat
gatctggatgggctactcattgatgaatttaaacctgttacaaagatagtttgcaagtta
ccatccttcttctcctatgcacttttcagaaagattgatgttgactgcactgggatagtg
accagggatgcgtttgtcaaatactgggtggatagcaacatgctaacattggacgtagca
actcaaatattcaatattctaaaacagccagactgcaaataccttactcagtctgatttc
aaacctattcttcgagaacttctggcaactcattcagggttggaattcttacagaatact
cctgaatttcaagaaagatatgctgaaactgtcatatacagaatattttactacatcaat
agatcaggaaatggctgtcttacacttcgggagctgaaacgtggaaatcttattgatgca
atgaaccatgcagatgaagaagacgacattaacaaagttataaggtacttctcttatgaa
catttctatgtaatatactgcaagttttgggagctggatacagaccatgatttcttgatt
gacaaggagaatctcgtcagatatggtaatcatgcccttacctacaggattgttgataga
attttttcacaggtgccaaggaagtttactagcaatgttgaagggaagatgtgttatgaa
gattttgtttacttcatgctctcagaggaggacaaatcatctgagcccagccttgaatac
tggttcaagtgcttagatttagatggaaatggtgtgttgacacccaatgaattgcaatac
ttctatgaggagcagctgcaccgaatagaatgcatggcccaggaacctgtgctatttgag
gatatcctgtgtcaaatagttgacatgattgcaccagagagggaagattatatcacactg
cgcgacttgaaaggatgcaaactttcaggaaatgttttcaatatccttttcaacctcaat
aagtttgtagcttttgaaagccgtgacccctttctcattcgccaggagcgtgaggagcca
actttaacagagtgggatcgctttgcacatagagaatatatcaggctttcaatggaagaa
gatgttgaagatgtctcaaatggaagtgcagaggtttgggatgaatcatttgaggctcct
ttttag
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