Populus alba (white poplar): 118052852
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Entry
118052852 CDS
T07314
Name
(RefSeq) chromatin-remodeling ATPase INO80 isoform X1
KO
K11665
chromatin-remodeling ATPase INO80 [EC:5.6.2.-]
Organism
palz
Populus alba (white poplar)
Pathway
palz03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
palz00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
118052852
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
palz03036
]
118052852
Chromosome and associated proteins [BR:
palz03036
]
Eukaryotic type
Chromatin remodeling factors
INO80 complex
118052852
INO80 complex (yeast)
118052852
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
DBINO
Helicase_C
ResIII
DEAD
HDA2-3
PRIMA1
Motif
Other DBs
NCBI-GeneID:
118052852
NCBI-ProteinID:
XP_034919810
LinkDB
All DBs
Position
6:complement(3492444..3503328)
Genome browser
AA seq
1535 aa
AA seq
DB search
MENRRQAKDSLSYSNLFNLESLVNFRVPQPDDEFDYYGSSSQDESRGSQGGAMANFVNRN
LSERELNSVKRKRRYNNSEGEEEDRHFGARITEDKYRSMLGEHIQKYKRRYKDPLPSPAP
PPPPPPPRMGIPIPKSSLGGSKTRKLGSEQRGGLHAMETTSEWANDVTPSKRREYHEPEF
TPRIYYEPPYLDIGDGVTYRIPPSYDKLAASLNLPSFSDMRVEEVYLKGTLDLGSLAAMI
ANDKRFGPRSQAGMGEPQSQYESLQARLKASTASSSAEKFSLKISEEALNSTIPEGAAGN
IRRLILSEGGVMQVYYVKVLEKGDTYEIIERGLPKKPKIIKDPSIIEREEMEKIGKVWVN
IVRRDIPKHHRIFTTLHRKQLIDAKRFSENCQREVKMKVSRSLKIMKGAAIRTRKLARDM
LLFWKRVDKEMAEVRKKEEREAAEALKREQELREAKRQQQRLNFLIQQTELYSHFMSNKP
SSQPSEALPIGDEMTDDQGMDLSTAEAGPDDQEEDPEDAELRKEALKAAQDAVSKQKLLT
SAFDIECSKLREAADIEGPINDASVAGSSNIDLQTPSTMPVTSTVQAPELFRGSLKEYQL
KGLQWLVNCYEQGLNGILADEMGLGKTIQAMAFLAHLAEEKNIWGPFLIVAPASVLNNWA
DEISRFCPDLKTLPYWGGLQERTVLRKNINPKRLYRRDAGFHILITSYQLLVSDEKYFRR
VKWQYMVLDEAQAIKSANSIRWKTLLSFNCRNRLLLTGTPIQNNMAELWALLHFIMPTLF
DSHEQFNEWFSKGIENHAEHGGTLNEHQLNRLHAILKPFMLRRVKKDVISELTRKTEVMV
HCKLSSRQQAFYQAIKNKISLAELFDGNRGHFNEKKIMNLMNIVIQLRKVCNHPELFERN
EGSTYFYFGEIPNSFLPPPFGELEDIHYSGGRNPITYKVPKVVHNEIVQSSEVLCSAIGR
GVGRESFQKHFNIFSPENVYRSVFAQDNISDRLLIKSGTFGFTHLMDLSPAEVAFLATSS
FMERLLFSIVRQGQQFLDGTIDLLMEDMEDDNGNHLEKCKVRAVTRMLLMPSRSETDILK
RKIATGLADNPFKALVNSHQDRLLSSIKLLHSTYTSIPRTRAPPIDGQCSDRNFAYQMME
ELHQPRVKRLLIGFARTSEFNGPRKPEGPHPLVQEIESELPVSQPALQLTHKIFGSCPPM
QSFDPAKLLTDSGKLQTLDILLKRLRAENHRVLLFAQMTKMLNILEDYMNYRKYRYLRLD
GSSTIMDRRDMVRDFQLRNDIFVFLLSTRAGGLGINLTAADTVIFYESDWNPTLDLQAMD
RAHRLGQTKDVTVYRLICKETVEEKILQRASQKHTVQQLVMTGGHVQDDLLAPEDVVSLL
LDDAQLEQKMREIPQQAKDRQKKKPTKAIRVDAEGDATFEDLTETVTQGTGNEPSEDTEK
LKSNNKKRKAASDKQTTPKPRNSQKNELNSASMDYELDDPFLNDEPQSQRPKRLKRPKKS
VNEKLEPAFTATPQVDSSQMQYPHANNLPSTYSNT
NT seq
4608 nt
NT seq
+upstream
nt +downstream
nt
atggaaaacaggagacaagccaaggactcgctttcttactccaatttattcaatcttgag
tctttggtgaacttcagagttccacaacctgatgatgaatttgattattatgggagtagt
agtcaggatgagagcagaggtagccaaggtggagcaatggcgaattttgttaataggaat
ctatcagagagggaattgaattcggtgaagagaaagaggcggtataacaacagcgaggga
gaggaggaagatagacatttcggggcacgcattacagaggataagtatcgctcaatgctg
ggagaacatattcagaagtacaagaggaggtataaggatcccttgccaagtcctgctcct
cctcctcctcctcctcctccccgtatggggattcccattccaaagagtagtttgggtggt
tcaaaaactaggaagctcgggagtgagcagcgaggagggttacatgccatggaaaccaca
tctgaatgggccaatgacgttactccatcaaaacgcagagaataccatgaaccggagttt
acacccagaatatactatgaacctccttatttggatattggggatggtgtcacttatagg
atacccccctcttatgataagcttgcggcatcattgaacttgccaagcttctcagatatg
cgggtggaggaagtttacttgaagggcaccttagatttgggttccttggcagcaatgata
gccaatgataaaaggtttgggcctagaagccaagcagggatgggagagccccaatcacaa
tacgaatcacttcaggcaagattgaaggcatcgacagcttctagctcagctgagaaattc
agtctcaagatatctgaagaggcattgaattccacaatcccagaaggggcagctggaaat
ataagacgccttattttgtcagagggtggtgtaatgcaggtttactatgttaaggttttg
gagaaaggagacacatatgagatcattgagcggggtctacctaagaagccaaagataatt
aaagacccttccattattgagagggaggaaatggagaagattggcaaggtttgggtaaac
attgtcagaagagacatacctaagcaccataggattttcactacgttgcatcgaaagcaa
ctaattgatgccaagaggttctcagaaaattgtcaaagagaggtcaaaatgaaggttagt
agatcactcaaaataatgaagggtgctgcgattcgcactaggaagttagctagagatatg
ctgctgttttggaagcgagtggataaggagatggcagaggtgaggaaaaaggaggaaaga
gaagcagcagaagctttgaagcgtgaacaagagctccgggaagcaaaaagacagcagcaa
aggctcaattttctcatacaacaaacagaactctacagtcatttcatgtcaaacaaacca
agttcacagccctcagaagctttgccaattggagatgaaatgacagatgatcaaggaatg
gatttgagcactgctgaagcagggcctgatgatcaggaagaagatcccgaggatgctgaa
ttgagaaaagaggctctcaaagctgctcaagatgcagtctcgaagcagaaattgttaaca
agtgcttttgatattgagtgctcaaagctgcgtgaagctgctgatattgagggacctata
aatgatgcctcagttgcaggatctagcaacattgatttgcagacaccctccaccatgcct
gttacatcaacagttcaggcaccagagttgtttagaggtagcctcaaagaatatcagttg
aagggtcttcagtggctggttaattgttatgagcagggattaaatggtatacttgctgat
gagatgggccttggaaagactattcaagccatggcattcttggctcatttagctgaggaa
aaaaatatctggggtccttttctgattgttgctccagcttctgtcttgaataactgggct
gatgaaatcagtcgcttctgccctgacttgaaaacccttccatattggggtgggcttcaa
gagcggacggtacttaggaaaaacattaatccaaagcgcctttaccgaagggatgctggt
tttcacattctcattaccagctatcaattgctagtgtctgatgagaagtattttcggcgt
gtaaaatggcaatacatggtattagatgaagcccaggctattaaaagtgctaacagcata
agatggaagacattgctcagttttaattgtcggaatcgcttgctgctgactggtacaccg
attcagaataacatggcagaattgtgggcccttctgcatttcatcatgccgacattgttt
gacagccatgaacagttcaatgagtggttttctaaaggaattgagaaccatgcagaacat
gggggtacattaaatgaacaccagctaaacagattgcacgcaattcttaagccttttatg
ctgcgtcgagtgaagaaagacgtgatttctgagttaacaaggaaaacagaagttatggtg
cactgcaagttgagctctcgacaacaagctttctatcaagctattaagaacaagatatct
cttgctgagttgtttgatggcaaccgtggacatttcaatgagaagaaaattatgaatcta
atgaacatagtcattcagctgagaaaggtttgcaaccatcctgagttgtttgaaaggaat
gagggaagcacatatttctattttggagagattcccaattcttttcttccccctcctttt
ggggagttggaggacatacattattcaggaggtcgaaatcctatcacatacaaggtgcca
aaagtagtccacaatgagattgtccaaagttccgaagttctttgctcagcgattggacgt
ggtgttggcagagagtcatttcaaaagcacttcaacatattctctcctgaaaatgtgtat
cggtctgtatttgcacaggacaatatctcagatagattgcttattaagagtgggacgttt
ggttttacccatttgatggatttgtccccagcagaggttgcatttctggcaactagttca
tttatggagaggctgttgttttctattgtgagacagggccaacaatttttggatggaacc
atagacttgctcatggaagacatggaagatgacaatggcaatcaccttgagaaatgtaaa
gtacgagctgtcacacgaatgttattgatgccatcaagatctgagacagatatcctaaaa
aggaaaattgcaacaggccttgctgataatccgtttaaggctctagttaactctcatcag
gacaggcttctgtccagcattaagctccttcactcaacttacacgtccatcccacggact
agagctccaccgattgatggccaatgctcagacagaaactttgcctaccaaatgatggaa
gaattgcatcaacccagggtcaagaggttgttaattggttttgcacgcacatctgaattt
aatggacccagaaagccagagggtcctcatcctttagttcaggagattgaatctgaacta
cctgtttcacaacctgctcttcagttgacacacaagattttcggttcttgcccccccatg
caaagctttgacccggcaaagcttctcacggattctggaaagcttcaaacacttgatatt
ttactgaaacgactgcgagctgaaaaccaccgggttctattgtttgcacaaatgacaaaa
atgctaaatattcttgaggactacatgaattataggaaatatagatatcttagacttgat
gggtcctccaccatcatggatcgtcgggatatggtcagagacttccagcttaggaatgat
atttttgtattcttgctgagtaccagagctggtgggcttggtatcaatttgacagctgcc
gatactgttattttttatgaaagtgattggaatcctactctagatttacaggcaatggat
agagcacatcggctgggccagacaaaggatgttactgtctaccggctcatttgtaaagag
acggttgaggaaaagattttgcaaagagcaagccagaaacatactgtgcaacagcttgtt
atgacaggtggtcatgttcaggatgatctcttggctcctgaggatgtggtgtccttgctt
ctggatgatgcccagttggagcagaagatgagagaaattccacagcaggccaaggataga
caaaagaaaaaaccaacaaaggccatacgggtagatgcagaaggtgatgcaactttcgaa
gatttgactgaaactgtcactcagggaactggaaatgaaccatctgaggacacagagaaa
ttgaaatccaataacaaaaagaggaaagctgcttctgacaagcagactacaccaaagcct
aggaattcacagaagaatgaactaaattctgcatcaatggactatgaattggacgatcct
tttctaaatgatgagccacagtcacagcgacccaagaggttgaagaggccaaagaagagt
gtaaatgagaaactcgaaccagcatttactgccacaccccaagttgattcatcgcagatg
caatatccacatgcaaataatcttccttctacatactctaacacatga
DBGET
integrated database retrieval system
