KEGG   Populus alba (white poplar): 118052953
Entry
118052953         CDS       T07314                                 
Name
(RefSeq) UBP1-associated protein 2B
  KO
K12741  heterogeneous nuclear ribonucleoprotein A1/A3
Organism
palz  Populus alba (white poplar)
Pathway
palz03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:palz00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    118052953
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:palz03019]
    118052953
   03041 Spliceosome [BR:palz03041]
    118052953
Messenger RNA biogenesis [BR:palz03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Other transport factors
     118052953
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     118052953
Spliceosome [BR:palz03041]
 Common components
  Common spliceosomal components
   hnRNP proteins
    118052953
SSDB
Motif
Pfam: RRM_1 RRM_7 RRM_Nup35 BUD22
Other DBs
NCBI-GeneID: 118052953
NCBI-ProteinID: XP_034919947
LinkDB
Position
6:2126313..2129513
AA seq 472 aa
MARKRKLDSKSTETAEEPPKKQQQQEEPPKEEPQEEEVEEEEEEEYEEVEEEEEDNEDDP
DGETNQNAQISAVENLNDDDDEDEEPIEKLLEPFGKDQLINLLSEAADGHRDVADKIRQV
ADQDPVHRKIFVHGLGWDTNAEALINAFKPYGEIEDCKAVCDKVTGKSKGYGFILFKKRS
GARKALKEPQKKIGNRMAACQLASIGPVPQSSAGPSGPIAAAVQTQQPVSEYTLRKIYVS
NVGANLDPQKLMSFFSEFGEIEEGPLGLDKATGKPKGFCLFVYKTVESAKKALEEPHKSF
EGHILHCQKAVDGPKHAKSQKPPQQHHNMQSSHYQRNDGGGYVASGGRGGHLMAPAAAGA
GIGFNQSAAAPALNPALGQALTALLATQGAGLGGLTNLLGTLGSAAAVTQGGVPSAAHGM
QGAYGNQASISPGVIGAYANQGAMQGGYPNQQMGQGGSGRGQHGQYTPYMGH
NT seq 1419 nt   +upstreamnt  +downstreamnt
atggctagaaaacgaaagctcgactccaaatccaccgaaacagcagaagaaccgccgaag
aaacaacagcaacaagaagagccaccaaaggaagaacctcaagaagaagaggtagaagag
gaggaggaggaagaatatgaagaagtggaagaggaggaagaagataatgaagatgatcca
gatggagaaaccaatcaaaacgctcagatctcagctgttgagaatctaaacgacgacgat
gacgaagacgaggagccgattgagaaacttcttgaaccgtttggaaaagaccagttgatt
aatttacttagtgaagcagcggatggtcaccgagatgttgcagataaaatccggcaagta
gctgaccaagatccggtgcaccggaagatttttgttcatgggcttggttgggatacgaat
gctgaggctttgatcaatgcgtttaagccttatggtgagattgaggactgtaaagctgtg
tgcgataaggttacggggaaatcgaagggttatgggtttattttgtttaagaaaaggagt
ggggcgcggaaggcgttgaaggagccgcagaagaagatagggaataggatggcagcttgt
caattggcttctattggtccggttccacagtccagtgctggaccctctgggccgattgct
gctgctgtgcaaacacagcagccggtttcggagtatacgctgaggaagatttatgtgagt
aatgtgggagcaaatttggatcctcagaagctgatgagtttcttttcggagtttggagag
attgaagaaggaccgttagggcttgataaagcgactgggaaaccgaaagggttttgtttg
tttgtttataagacagttgagagtgctaagaaagcgttagaagagccacataagagtttt
gaagggcacattttgcattgtcagaaagctgttgatgggccaaaacatgcgaaatcgcag
aaaccaccacagcagcatcataatatgcaaagctcgcattaccagaggaatgatggaggt
gggtatgttgctagtgggggtcgtggtggtcatttaatggctccggctgctgctggtgct
gggattgggtttaatcagagtgctgctgctcctgctttgaaccctgcacttggacaggca
ctgaccgcgttgcttgccactcagggtgctggattgggagggctcactaatttgcttggg
actttggggtctgctgcggctgtgacccagggtggtgtgcctagtgcagctcatggaatg
cagggtgcctatgggaaccaggcgagcataagtcccggagtgataggagcttatgcgaat
cagggagctatgcagggtggatatccaaatcagcagatgggacagggtggttctgggaga
ggacaacatgggcaatataccccttatatgggtcactag

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