Populus alba (white poplar): 118052956
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Entry
118052956 CDS
T07314
Name
(RefSeq) protein argonaute 4A
KO
K11593
eukaryotic translation initiation factor 2C
Organism
palz
Populus alba (white poplar)
Brite
KEGG Orthology (KO) [BR:
palz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
palz03019
]
118052956
03036 Chromosome and associated proteins [BR:
palz03036
]
118052956
Messenger RNA biogenesis [BR:
palz03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
118052956
Chromosome and associated proteins [BR:
palz03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
118052956
RNA interference (RNAi) pathway
RITS (RNA-induced transcriptional silencing) complex
118052956
microRNA pathway
RISC loading complex
118052956
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Piwi
ArgoN
PAZ
ArgoL1
ArgoL2
ArgoMid
THF_DHG_CYH
Motif
Other DBs
NCBI-GeneID:
118052956
NCBI-ProteinID:
XP_034919953
LinkDB
All DBs
Position
6:complement(2138107..2146280)
Genome browser
AA seq
916 aa
AA seq
DB search
MESTEEPEALPPPPPPPEIPPNVVPVQLTTDSVPEETKKISKPKRSPIARRGVGSRGQKI
QLLSNHFKVSISNTGGHFFHYCVSLSYEDGRPIDAKGIGRRLIDKVHETYGSDLAGKDFA
YDGEKSLFTIGALPRNKMEFTVLLDSFSSNRNSGNGSPVGNGSPNETDKKRMRRAFQSKT
FKVEMSFAAKIPMQAIAAALRGQESENSQEALRVLDIILRQHAAKQGCLLVRQSFFHNDP
KNYVDLGGGVLGCRGFHSSFRTSQGGLSLNIDGSTTTIIQPGPLIDFLIANQNVSNPFQI
DWAKAKRTLKNLRIRVSPTNQEYRITGLSENTCKEQMFSLKSRASDGNDVESVDITVYDY
FVNHRSIDLRYSGDLPCINVGKPKRPTYIPVELCSLLPLQRYIKALTVLQRSQLVEKSRQ
KPQEKIRILTDVMKSNNYAAEPMLRSCGITISSQFTQVQGRVLTAPKLKAGNGEDVIPRN
GRWNFNHKKFFEPSKIENWAVVNFSARCDVRGLVRDLIRFGEMKGILISDPVDVVEENGQ
FRRAPPLVRVEKMFEQIQKAFPNAPPRFLVCLLPDRKNSDIYGPWKRKNLAEYGIFNQCL
APTRVNEQYILNVLLKINAKLGGLNSLLAMEQSRNIPFISKVPTIIFGMDVSHGSPGQSD
MPSIAAVVSSRNWPLLSRYRASVRSQSPKVEMVDSLFTLTPDKKDDSGIVRELLLDYYRS
SGQTKPAQIIIFRDGVSESQFNQVLNIELDQIIEACKFLDESWSPKFTVIVAQKNHHTKF
FQDGSPDNVPPGTVIDTAVCHPQSYDFYMCAHAGMIGTTRPTHYHVLLDEIGFSADDLQE
LIHSLSYVYQRSTTAISVVAPVRYAHLAATQISQFLKCDDMSETSSSHGGLTSAGQTPVP
ELPELHRNVCSSMFFC
NT seq
2751 nt
NT seq
+upstream
nt +downstream
nt
atggaatccactgaagaaccagaggccctccctccacctccacctccacctgagataccg
ccaaatgtagttcctgttcaattgacaacagactctgttccggaggaaacaaaaaagata
tcaaaaccaaaacgttccccaattgccaggcgtggagttgggtccagagggcaaaaaata
caactgctctcaaatcatttcaaagtttccatctctaatactggtggccacttttttcat
tactgtgtttccttgtcttatgaggatggtcgccctattgatgcaaagggcattgggaga
agattaattgataaagttcatgagacttatggctcagaccttgctgggaaggactttgca
tatgatggagagaagagcttatttacaattggtgctctgcctcgaaacaaaatggaattc
actgttttgcttgatagtttttcatcaaataggaattctggaaatggcagtcctgttggc
aatggaagtccaaacgagactgataaaaagaggatgaggcgggcattccagtccaaaaca
tttaaagtggagatgagttttgctgccaaaatccctatgcaggctattgcagctgctttg
cgtggtcaagaatcagaaaactcacaggaagccttaagagtcttagacatcattttaaga
cagcatgcagccaaacagggttgccttcttgttcgccagtcattctttcacaatgatcca
aagaactatgttgatctgggaggaggtgtccttggatgccgaggatttcattcgagcttt
agaacctcgcagggtggattatccctaaatatagatggttcgactacaacgataatacag
cctgggccccttattgactttctcatagccaaccagaatgtgtcaaacccctttcagatt
gactgggcaaaggctaagcgaacattgaaaaatttgaggataagggtatcacctaccaat
caagagtacagaatcactggcttgagtgaaaatacttgcaaagagcaaatgttctctctg
aaatcaagagcatctgatggaaatgatgttgaaagtgttgacattacagtttacgattat
tttgtaaatcatcgcagcatagatttacgctactctggagatttgccttgcattaatgtt
ggcaagcctaaaaggcccacttacattcctgtcgagctttgttcactgcttcccttgcaa
cgctatataaaggcactaactgttcttcagagatcacagttagtagaaaaatcaagacaa
aaaccacaagaaaaaattaggatcttaactgatgttatgaaaagcaacaactatgctgca
gaaccaatgttgcgttcttgtggtatcaccatcagcagccagtttactcaagttcaaggc
cgtgtcctaactgctccaaagttaaaggcaggaaacggcgaggatgttattccaagaaat
gggcggtggaattttaatcataagaaattttttgaaccttctaaaattgaaaactgggcc
gtggtgaacttttctgctcgttgtgatgtgcgtggtctagtcagagatttgataagattt
ggagaaatgaaagggattctcataagtgacccagtggatgttgttgaagagaatggtcag
tttcgacgggcaccgcctcttgttcgagtggagaagatgtttgaacagatacagaaagca
tttccaaatgctcctcctcgctttctcgtgtgtcttcttcctgataggaagaactctgac
atatatggtccttggaaaagaaagaatcttgcagaatatggaattttcaatcaatgcctg
gcacccactagagttaatgagcagtatatacttaatgttctcctgaagataaatgccaag
cttggtggtttgaattctttgttggccatggagcaatcacgaaacatcccattcatctcg
aaggttcctacaataatatttggaatggatgtatcacatggttcgcctggtcagtctgac
atgccctccattgctgcggttgtcagttctagaaactggcctctgctttctcgttataga
gcttctgtgcggagtcagtcaccaaaagttgagatggtagattctctttttacactaaca
ccggataagaaagatgattctgggattgtcagggaattgttgctggactactataggagt
tctggccaaacaaaaccagctcagataatcatattcagggatggagttagcgagtcacag
ttcaatcaagtcctcaacatcgagctggatcaaatcattgaggcatgcaagttccttgat
gaaagctggtcacccaagttcactgttattgttgcacagaaaaatcatcacactaaattt
ttccaagatggatctccagacaatgttcctcctggaaccgttattgatactgctgtttgt
cacccacaaagctatgatttctacatgtgtgcacatgcagggatgataggaacaacaagg
ccaacacattatcatgttcttttagatgagattggcttttcagctgatgatctacaggag
ttgattcactctttgtcttatgtgtaccaaagaagcacaacagcaatatctgtagttgct
cctgtccgttatgctcacctggcagcaactcagatttcacaattcttgaagtgtgatgac
atgtcagagacatcctcgagccatggaggtctaacttctgctgggcaaacccctgtgccc
gagcttcctgagctacaccggaatgtctgcagctctatgtttttctgctga
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