Populus alba (white poplar): 118052986
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Entry
118052986 CDS
T07314
Name
(RefSeq) probable E3 ubiquitin-protein ligase RHC1A
KO
K11982
E3 ubiquitin-protein ligase RNF115/126 [EC:
2.3.2.27
]
Organism
palz
Populus alba (white poplar)
Brite
KEGG Orthology (KO) [BR:
palz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
palz04131
]
118052986
04121 Ubiquitin system [BR:
palz04121
]
118052986
Enzymes [BR:
palz01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
118052986
Membrane trafficking [BR:
palz04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
118052986
Ubiquitin system [BR:
palz04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
118052986
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
Zn_ribbon_19
zf-C3HC4_2
zf-RING_11
zf-C3HC4
zf-rbx1
zf-RING_UBOX
zf-C3HC4_3
zf-RING_5
zf-ANAPC11
zf-Nse
CxC4
Rad50_zn_hook
Motif
Other DBs
NCBI-GeneID:
118052986
NCBI-ProteinID:
XP_034919986
LinkDB
All DBs
Position
6:complement(2351708..2354064)
Genome browser
AA seq
308 aa
AA seq
DB search
MSSSRNTHWCYSCRRPVRLRGRDAACPYCSGGFVQELDDMHRINPLDFFGMDGDDDHDNM
FGLMEAFSAFMRQRMADRSHNHDVRSRSDSIPEHNPGFGPLLIFGGQIPFRLSGNGGFEA
LFSGSPGVAFARGNAGDYFVGPGLEELFEQLSANDRRGPAPATRSSIDAMPTVKITQRHL
RTDSHCPVCKDKFELGSEARQMPCNHLYHSDCIVPWLVQHNSCPVCRQELPPQGSSSGHS
YQSSGSRSRNSNYSGRENSREGRRNPFSYLWPFRSSNSSSNHDETPGSSSPTMHENNHQM
GYSGWPFN
NT seq
927 nt
NT seq
+upstream
nt +downstream
nt
atgtcaagcagcagaaatacccactggtgttacagctgcaggcggccagttcgactgcga
gggcgagatgcagcttgcccctactgcagcggaggatttgtccaagaacttgatgatatg
catcgcatcaacccgttggatttttttggaatggatggtgatgatgatcatgacaatatg
tttgggctcatggaagctttctcagcctttatgaggcaacgaatggctgatagaagtcat
aatcatgatgttagatctagatcagattcaattcctgaacataatccaggttttggtcct
ctgttgatctttggtggccaaattccttttaggttgtctggaaatggtgggtttgaagct
ctcttttctgggtctcctggtgttgcctttgcaagaggtaatgccggtgattattttgta
ggccctggacttgaagaattgtttgaacagctttctgctaatgatcggcgaggccctgcc
ccagcaaccaggtcatcaattgatgcgatgcccactgttaagatcacacaaaggcatctt
cgcactgattcacactgtccagtttgcaaagataaatttgagctggggtctgaagcaagg
cagatgccatgtaatcatttataccactcagattgcatagttccatggctagtccagcac
aactcatgccctgtttgtcggcaggagctaccaccgcaaggatcgagcagtggacacagt
tatcaaagctcaggctctcgaagcagaaacagcaattatagtggaagggagaatagtagg
gaaggaagacgcaatccattttcttatctgtggcccttccgctcatccaattcgagttct
aaccatgatgagactcctggaagcagctcaccaaccatgcatgaaaacaaccaccagatg
gggtattcaggatggccttttaactag
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