Populus alba (white poplar): 118052993
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Entry
118052993 CDS
T07314
Name
(RefSeq) syntaxin-52-like
KO
K08503
syntaxin of plants SYP5
Organism
palz
Populus alba (white poplar)
Pathway
palz04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
palz00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
118052993
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
palz04131
]
118052993
Membrane trafficking [BR:
palz04131
]
SNARE
SNAP-25[C] (Qc)
STX8
118052993
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
SNARE
Pox_EPC_I2-L1
Sec20
YqeY
STX6_10_61_N
Use1
DUF6548
DUF7032
Spectrin_Anc-1
DUF6709
Motif
Other DBs
NCBI-GeneID:
118052993
NCBI-ProteinID:
XP_073265816
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Position
6:2400089..2402575
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AA seq
231 aa
AA seq
DB search
MASPSESWMQEFNEASKLGDEISAMISGKNSLPQSGPETQRQFSAARRKATILRTKLDIL
QSLLSALPSKQPLSGKEMNRRQEMLKNLSTKVNQMAGALNMFSAANRENLLGPDSKTDDV
INRASSFDNQGLVGFQRQIMREQDEGLEKLEETVVSTKHIALAVNEELTLHTRLLDDLDE
HVDVTNSRLQRVQKNLAILNKRTKGGCACWVFLAIAIVILIVVVWLLIKYL
NT seq
696 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcaccatcagaatcatggatgcaagaattcaatgaagcatctaaacttggtgat
gaaatcagtgctatgatttctgggaagaactctttgcctcaatcaggaccagaaacacaa
cggcaattctctgcggctcggagaaaggccactattttgaggaccaaacttgatatcttg
cagtcccttttgtcagcacttcctagcaaacagccattatcagggaaagagatgaatcgg
cgtcaagaaatgctgaaaaatttgagtacaaaagttaaccagatggctggtgctctcaat
atgttcagtgctgctaacagagagaacttgcttgggcctgatagcaagacagatgatgtt
attaatagagcatctagcttcgacaaccagggtcttgttggttttcaaaggcaaatcatg
agagaacaagatgaaggcctagaaaaattagaggagacggtggtaagtacaaaacacatt
gcgttggctgtcaatgaggaacttaccttacacactaggcttctggatgacttggacgag
catgtggatgtaacaaattcccgtttacagagggttcaaaagaatctggctatcctgaac
aaacgcaccaaaggtggctgtgcttgctgggtctttctggccattgcaattgtgattcta
attgttgtcgtgtggcttttgattaaatatttgtaa
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