Populus alba (white poplar): 118053158
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Entry
118053158 CDS
T07314
Name
(RefSeq) transcription initiation factor IIB-2 isoform X1
KO
K03124
transcription initiation factor TFIIB
Organism
palz
Populus alba (white poplar)
Pathway
palz03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
palz00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
118053158
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
palz03021
]
118053158
Transcription machinery [BR:
palz03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
118053158
Prokaryotic type
Archaeal type
TFB
118053158
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
Cyclin_N
Motif
Other DBs
NCBI-GeneID:
118053158
NCBI-ProteinID:
XP_034920212
LinkDB
All DBs
Position
6:complement(3608240..3612643)
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AA seq
368 aa
AA seq
DB search
MGDAFCSDCKKHTEVVCDHSAGDTVCSECGLVLESHSIDETSEWRTFANESGDNDPVRVG
GPTNPLLTDGGLSTVIAKPNGASGDFLSTSLGRWQNRGSNPDRGLILAFKTIATMSDRLG
LVATIKASKITMNRTITNIKSASPSLSLTRKGLDAFLVWLFMRIPPNVSFSLSGDAFFII
LKDRANEIYKKVEDQKSSRGRNQDALLAACLYIACRQEDKPRTVKEICSVANGATKKEIG
RAKEYIVKQLGLEAGQSVEMGTIHAGDFMRRFCSNLGMSNHTVKAATEAVKTSEQFDIRR
SPISIAAAVIYIITQLSDDKKPLRDISLATGVAEGTIRNSYKDLYPHVSKIIPAWYANEE
DLKNLSSP
NT seq
1107 nt
NT seq
+upstream
nt +downstream
nt
atgggggacgctttctgttcagattgtaagaaacatacagaggtagtatgcgaccattca
gcaggagacacagtatgttcagagtgtggtcttgtcttagaatcccactcgatcgatgaa
acatcagagtggagaacctttgcgaatgaatcaggagataatgatccagttcgtgttggt
ggacctactaaccctttgttaacagacggtggcctttctactgttattgctaaacctaat
ggtgcttccggagatttcttgtcgacttctcttggtcgctggcagaaccgtgggtccaat
cctgatcgtgggttgattctggcttttaaaaccattgctaccatgtctgacaggttgggc
cttgttgcaacaatcaaggcatctaaaattacaatgaatagaacaatcacaaatattaaa
agcgcttccccatctctttctcttacgaggaagggcttggatgcttttcttgtttggttg
ttcatgagaattccccctaatgtttctttttccctctccggcgatgcatttttcataata
ttgaaggatagggctaatgagatctataagaaggtggaggatcaaaagtccagtagagga
aggaatcaggatgctttattggctgcttgcctctatattgcttgtcgacaagaagacaag
ccccgaactgtaaaggaaatttgctctgtcgccaatggagccacaaagaaggaaattggc
cgagcaaaagaatacatagtgaaacaactgggtttggaggcaggtcagtctgtggagatg
ggaactatacatgctggggattttatgagacgtttctgttccaatcttggaatgtctaat
cacacagttaaagctgccacagaagctgttaagacatcagaacagtttgatataaggagg
agtcctatatcaatcgcagcagcagttatttatataataactcagctttcagacgacaag
aagcctctccgagatatttcactagcaactggagttgctgaaggaacaatcagaaattcg
tacaaggatctttatccccacgtatcaaagataataccagcttggtatgcgaatgaggag
gatctgaagaaccttagcagtccttga
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integrated database retrieval system
