Populus alba (white poplar): 118053171
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Entry
118053171 CDS
T07314
Name
(RefSeq) uncharacterized protein
KO
K14794
ribosomal RNA-processing protein 12
Organism
palz
Populus alba (white poplar)
Brite
KEGG Orthology (KO) [BR:
palz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
palz03009
]
118053171
Ribosome biogenesis [BR:
palz03009
]
Eukaryotic type
90S particles
Other 90S particles
118053171
Pre-60S particles
Other pre-60S particles
118053171
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRP12_HEAT
RIX1
GREB1_C
Htt_N-HEAT_1
Motif
Other DBs
NCBI-GeneID:
118053171
NCBI-ProteinID:
XP_034920235
LinkDB
All DBs
Position
6:complement(3743454..3753442)
Genome browser
AA seq
1166 aa
AA seq
DB search
MKHKKPEPEPETQLKNDTEICQQLLSRYSASTAPQHRHLLATAAALRSILTAESLPLTPS
AYFSAAINNLSDSKALDSTAIAALLSFVSIVVPLIEEKGIKDAKVKEAVAVLVEVAVERE
GVGVGSLGCVVKCLGVMILGFCDLEKWDSVKAGFESLIKFSVDKRPKVRRSAQECLEKVF
KSFSSSSVVKEASKLVFSLFKNYMPVALTLSESRIFDESKEETLSKLEHLEVIHMLNLLK
ATVPYLSVKISSKVLPELVKLLRSDFSVLTRQIFQNIEAFFVSSSDEVIGPQQEKIIDSL
SGYLSLGQKNPVDTVLSAATLLRTILNKLRAGGSSSWTSNGHKIFGSTAGLLTDEATASQ
ASDIMKELIHHYIDPKEVVINESQSLDDSSQESEEANMIKSTCAVLENILNSYDGIPNEH
LLGVISVLFKKLGDISHIFMKNIILKLADLMNDVGRDKPDTNHLQNCMGSAVVAIGPEKM
LMLLPISIDPDNFTCSNIWLVPILKDHVVGASLGYYMEHIVPLAKSFKQAGQKVRKSVIG
QDLQAHAYGLWGLLPAFCRYPVDTHKKFGALAELMITSLKKYSFMHQNIAVALQVLVNQN
RSVMLSKSDGGASNDNAVKDSVAPYSKKIATKNIKALASCSSKLLHALADLFVDSQSGKP
SFIKDAIACLASISNSSVTQKVFMSLLKRFRFVTGEGEFQQPKSDGDELIEEEARSLNVQ
EKDVHRCVMMELASSLVVGAKTDFIDLIYKFVVFIFQATDVTGHCEAYHTLSRILQEHTW
FCSSRFVELIDLLLGLKSPDDVATLKNRFACFHILIVHALEMNSEEKNTKAFLMLNEIIL
ILKDAREDARKVAYDTLLFISSSLHNSSCATSREAYQRLISMITGYLSGSSPYITSGAVS
ALSVLVYNDTEICLEVPDLVPSLLSLLQNKALEVIKAVLGFTKVLVSCLQAKDLQNFLSD
IIIGVLPWSSVSRNHFRSKVTVILEIMIRKCGSSAVELDIPEKHKSFFKTVLQNRHHKST
SKEAGTNDTEKTPSDISPKRVEKPKNKESGSVPERTGSVHPGKRKREKKHNENPPTSSKP
GVSTGDGSGREGAKRARHFEHEKSIKVRSEDGWKKRNFNKEQTGDGKRKIEHRNTNKKGK
ASFRGPSSASKLHKPQKAWKKQKLNN
NT seq
3501 nt
NT seq
+upstream
nt +downstream
nt
atgaaacataaaaaacccgaacccgaacctgaaacccaattgaaaaacgacacagaaatc
tgccaacaactactctcccgatactccgcctctacagcaccacagcaccgccacctcttg
gcaactgctgccgcactccgttccatccttaccgccgaatcacttcctttaactccctca
gcttacttctctgccgcaatcaacaatctctccgattcgaaagctctagattccacggca
attgcggcgttactttcgtttgtttcgattgtggtgcccttgattgaagagaaggggatt
aaggatgcgaaggtgaaggaggcggtggccgtgttagtggaagttgcggtggagagagaa
ggagtgggagtggggagtttgggctgtgtggtgaagtgcttgggggttatgattttaggg
ttttgtgatttggagaagtgggattctgtgaaagcagggtttgaaagtttgattaaattc
tctgttgataagagaccaaaggtgaggaggagtgcacaagaatgtcttgagaaggttttc
aagtcttttagctcttcttctgttgttaaggaagctagcaaattggtcttttcgttgttc
aaaaattacatgcctgtagcacttacattgagtgagtcaaggatttttgacgagtctaaa
gaagaaacattatcaaagctggaacatctagaggtcattcacatgctaaatcttctgaag
gctaccgttccatatctctcggttaaaatcagttcaaaagttttgcctgaactagttaag
cttttgaggtctgatttctcagtgctgacgaggcagatttttcaaaatattgaagcattt
tttgtgagttcaagtgatgaagtgattggtccgcagcaggagaaaattatagattctctt
tctgggtatttatctctgggacagaagaatcctgtggacactgtattgtctgccgccacc
ctgctaagaactattttaaataaactccgagccggaggatcaagctcttggacaagtaat
ggacataaaatttttggttctacagcaggtcttttgactgatgaggctactgcatcacag
gcttcagatataatgaaggagttgatccaccactatatagatccaaaagaagtcgtgatt
aatgaaagtcaatcacttgatgattcaagtcaagagagtgaagaagcaaatatgataaaa
tcaacatgcgctgtcttggagaatattctgaattcatatgatggcattcctaatgaacac
cttttgggagtcatatctgttttgttcaagaagcttggagatatatcgcatatcttcatg
aagaacatcatacttaagcttgcagacttgatgaatgatgttggtcgtgataaaccagac
acaaatcatcttcaaaattgcatgggatctgcagtggttgccattggtccggagaagatg
cttatgctcctacctatctccattgatcctgacaattttacatgttcaaatatctggttg
gtacccatattgaaagaccatgttgttggagcttcgctagggtattatatggagcacatc
gtgcctcttgcaaaatcctttaagcaagctggtcagaaagttagaaaatcagtaattggt
caagatctgcaggctcatgcttatggcctctggggactgcttcctgccttttgtcgctat
cctgttgatactcacaaaaagtttggagctttggctgaacttatgattacttctcttaag
aagtactccttcatgcatcagaatattgctgttgccttacaggttcttgtgaatcaaaac
agaagtgtgatgttgtctaaaagtgatggtggtgcctcaaatgacaatgcagtaaaagat
tctgtagccccttattccaaaaaaattgcaaccaaaaacatcaaagctttggcatcatgc
tcttcaaagttgcttcatgctctagctgacttatttgttgattcacagtctgggaagccc
tcgtttatcaaggatgctattgcatgcttggcttctatcagcaattcttctgtcacccag
aaggttttcatgtcactacttaagaggtttcggtttgtaactggtgaaggtgagtttcaa
cagccaaagagtgatggtgatgaattgattgaggaagaagcacgcagcttgaatgtacaa
gagaaagatgtacacaggtgtgtgatgatggagcttgcatcttctctcgttgttggagcc
aaaacagatttcattgatctgatatataagtttgttgtcttcatctttcaggctactgat
gtaactggtcattgtgaagcataccacactctgagcagaattttacaggaacacacatgg
ttttgctcttctcggtttgtggagctgattgacttattacttggcctgaaatctcctgat
gatgttgcaactcttaaaaatcgatttgcttgtttccatattctcatagttcatgcatta
gagatgaactcagaggagaaaaatacgaaggcttttcttatgctcaatgagatcatactc
atcttgaaggatgcaagggaagatgctaggaaagtggcttacgatacactcctttttata
agttcctccttgcacaactcatcttgtgccacttccagagaagcttatcaaagactgatc
agcatgataacaggttatctctctggttcgtctccctacataacaagtggagcagtatct
gcactgtctgtactggtatataatgatacagaaatctgtcttgaagtgcccgatcttgtt
ccctctctcttatcattgctgcaaaacaaagctctggaagtcataaaagctgttttgggc
ttcacaaaagtattagtatcttgcttgcaagcaaaagacctgcagaatttcctatctgac
atcatcattggagttcttccctggtcatctgtctctagaaaccatttcagatcaaaggtt
acagtcatactggagattatgatacggaagtgtggttcttctgctgttgagttagatatc
ccagagaaacataagagttttttcaagactgttttgcagaatcgccatcacaagtcaact
tccaaggaagccggcacaaatgatacagaaaaaacgccgtcagatatatcacctaagagg
gtggagaagccaaagaacaaggaatcgggttctgtacctgagagaactggttcagtgcat
cctgggaagagaaagagggagaagaaacacaatgagaaccctccgacctcaagcaagcct
ggtgtatcaactggtgatggtagcggacgtgaaggggctaaaagagctaggcactttgag
catgaaaaatcaatcaaggttcggtcagaggatggttggaagaagaggaattttaacaaa
gagcaaactggtgatgggaaaagaaagatagagcataggaacacgaacaagaaaggcaaa
gcgtcatttcgcggacctagttctgcttccaaactacacaaaccccagaaagcatggaag
aaacagaaactcaacaactga
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