Populus alba (white poplar): 118053281
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Entry
118053281 CDS
T07314
Name
(RefSeq) LOW QUALITY PROTEIN: protein HASTY 1
KO
K14289
exportin-5
Organism
palz
Populus alba (white poplar)
Pathway
palz03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
palz00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
118053281
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
palz03016
]
118053281
03036 Chromosome and associated proteins [BR:
palz03036
]
118053281
Transfer RNA biogenesis [BR:
palz03016
]
Eukaryotic type
tRNA transport factors
tRNA export factors
118053281
Chromosome and associated proteins [BR:
palz03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Other miRNA pathway proteins
118053281
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exportin-5
Xpo1
Motif
Other DBs
NCBI-GeneID:
118053281
NCBI-ProteinID:
XP_034920395
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Position
13:complement(1988337..2001261)
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AA seq
1208 aa
AA seq
DB search
MEESNSNNHIANNVARAIVAALDWNSTPNARKAAVSFLESIKAGDVRILASSSFVLVKKD
WSSEIRLHAFKMLQHLVRLRWEELSPTERRNFANAAVELMAEIANSCEEWVLKSQTAALV
AEIVRREGLELWKELLPSLVSLSSQGPIQAELVSMTLRWLPEDITVHNEDLEGDRRRLLL
RGLTQSLPEMLPLLYTLLERHFGAALSEVGRQQLDIAKQHAATVTATLNAVNAYAEWAPL
QDLAKYGIIYGCGVMLSSPDFRLHACEFFKLVSQRKRPADASASEFDSAMRNIFQLMMNV
SRDILYKTGSSAGVMDESEFEFAEYIXESMVSLGSFNFQCISGDNTILSLYLQQMLGFFQ
HFKLALHYQSLLFWLVLMRDLMSKPKVTAFSADGSAFNSAGSSSGQVDDEKRRTLSLVDD
DICVVILDISFQRLLKKEKVFSGNSLSPGTLELWSDDFEGKGDFGQYRSKLTELMRVVAS
FKPLIAGAKISERILSIIKSIPNSQIPVQDLAVMESMQVALENVVNAVFDGSNGYAEVSS
EVHLALCRVFEDLLQQLLSLKWTEPTLVEILGHYLDALGPFLKYFPDAVGGVINKLFELL
MSIPFVVKDPSVSSARHARLQICTSFIRIAKSADKSVLPHMKGIADTMAYMQREGSLLRG
EHNLLGEAFLVMASAAGTQQQQEVLAWLLEPLSQQWTQLEWQNNYLSEPLGLIRLCSETA
FMWSIFHTVTFFEKALKRSGIRKGSLNLQSISTASTIHPMASHLSWMLPPLLKLLRAVHS
LWSPSISQMLPGDIKAAMTMGNAERYSLLGEGNPKLSKGSLTFIDGSHIDTSREGHTETN
EADIRNWLKGIRDSGYNVLGLSMTIGDPFFKCLDVHSVGVALLENIQSMEFRHTRQLVHS
ALIPLVKHCPMEMWEVWLEKLLHPLFIHVQQALTFSWSSLLHEGKAKVPDVLGILAEADL
KAEVMEEKLLRDLTREMCVLLSTIASPGLNTGLPTLEQSGHAIRVDASSLKELDAFASNS
MVGFLLKHNGLAVPALQICLEAFTWTDGEAVSKVLSFCASVILLGISAKNVQLREFVSKD
LFSAIIKGLALESNAVISADLVGFCREIFMHLCDRDPAPRQVLLSLPCIKPQDLVAFEEA
LTKTASPKEQKQHMKSLLLLATGNMLKAIAAQKSVNIITNVTMRPRSSVNAPETRIDEGD
TIGLAAIL
NT seq
3627 nt
NT seq
+upstream
nt +downstream
nt
atggaagagagtaatagcaataaccacatagcaaacaatgtggctcgagcaattgttgct
gctcttgactggaactctactcctaatgctcgcaaagctgctgtgtctttccttgaatcc
atcaaagcaggagatgtacgaattttggccagctcatcattcgttcttgtcaaaaaggac
tggtcttctgaaattcggttgcatgctttcaaaatgctgcagcatttggtacggttgcga
tgggaggaattgagcccaacagaacgcaggaactttgcaaatgctgctgttgagttgatg
gctgaaattgcaaattcctgtgaagaatgggtgctgaaaagtcagacagctgccctagtt
gctgagattgtcagaagagaaggcttagaactgtggaaagaactgcttccatctctggtt
tccctatctagtcagggccccatacaagctgagttggtttcgatgacactgaggtggctt
cctgaagatattacagttcacaatgaagatttagaaggtgatcggcgtaggttattgttg
cgagggcttactcagtcattgcctgaaatgctgccactactatacacgttacttgaaaga
cattttggagctgcattgagtgaagtaggtaggcagcaattggacatcgcaaaacagcat
gcagcaacagtaacagcgactttgaatgctgtcaacgcttatgctgagtgggcgcctttg
caggatctagccaaatatggcataatttatggctgtggtgtcatgctgtcttctcctgac
tttcgtcttcatgcctgtgaatttttcaaactcgtctcacaaaggaagagacctgccgat
gcctctgcttctgaatttgattctgcaatgcgtaatatctttcagctcatgatgaatgtc
tcaagagatattttgtacaaaactggctcaagtgctggagttatggacgagagtgaattt
gagtttgcagaatatatatgagagagtatggtgtctttgggttcttttaactttcaatgc
atttctggtgacaacactatactctctctttatttacagcagatgctgggcttttttcaa
cattttaagctagctcttcattatcaatccctgctattttggctggtgctaatgagagat
ttaatgtcaaagccgaaagttactgcattttcagcagatgggtctgcttttaacagtgca
ggctctagttctggacaggttgatgatgaaaaaaggaggactttaagccttgtggatgat
gatatttgtgttgtaattctggatatctctttccagcgcttgcttaagaaagaaaaggtt
ttctctgggaattccctttctcctggaacattggagttgtggagtgatgattttgaaggc
aagggtgacttcggccagtatcgttcgaagctgaccgagctgatgagagttgttgcttct
tttaagcccctaatagctggtgctaaaatctctgaaagaattctttcaatcattaagagc
attccgaattctcaaatacctgttcaggacttggctgtgatggaaagcatgcaagtggct
ttagaaaatgttgtcaatgcagtttttgatggatcaaatggctatgcggaggtcagttcg
gaagttcacctcgcgctgtgtagagtttttgaagatttacttcagcaactcctttctttg
aaatggacagagccaactcttgtggaaatcctagggcactatttagacgcgctgggtcca
tttttgaagtatttcccagatgcggttggtggtgtcattaataaattattcgagcttcta
atgtcaatcccatttgttgttaaggatccttcagtaagcagtgcacgccatgcaaggtta
cagatttgtacttcatttattcgaatagccaagtctgctgacaaaagtgttctccctcat
atgaaaggaatagctgataccatggcatatatgcaaagagagggctctctgcttcgtggt
gaacataatcttctaggtgaagcatttcttgttatggcttcagctgccgggactcaacaa
cagcaagaagttttggcctggttgcttgaacctttgagccaacagtggacacagctagag
tggcaaaataattatttgtctgagccactagggctgatccgtttgtgctctgagacagca
ttcatgtggtcaattttccacactgtgacattctttgagaaggcacttaagaggagtgga
atcagaaaaggcagtctgaatttgcaaagcatctcaacagcaagtactatacatccaatg
gcttctcatctgtcctggatgctgccacccctcttgaaacttctacgtgctgtgcactca
ctttggtctccatccatatctcaaatgttacctggagatatcaaagctgccatgactatg
ggcaatgctgaacgatatagtctccttggggaaggaaaccccaaattgtccaaaggttcc
ttaaccttcatagatggatctcatattgatacaagtagggaaggacacactgaaacaaat
gaagctgatatacggaattggttgaaaggtatcagagatagtggatacaatgtattgggc
ctatcgatgaccattggtgatccatttttcaaatgtttggatgttcattctgttggtgtg
gcactactggaaaacatacagtcaatggagttcagacatacaaggcagcttgtccattca
gctttgatacctttggttaaacattgtcctatggaaatgtgggaggtctggctcgaaaag
ctcttgcatccattatttatccatgtacagcaagctcttaccttttcttggtccagtctc
ctgcatgagggtaaagcaaaggtcccagatgtccttggcatccttgctgaggcagacttg
aaagcagaagtaatggaagagaaactgcttcgagacctaactcgtgagatgtgtgttctt
ctctctacaatagcttcgcccggactaaatactgggcttcctactttagaacaatctggc
catgctatccgtgtggatgcatcttctttgaaggaattggatgcttttgcatcaaactct
atggttggttttcttttgaagcacaatggcttggctgttccagcattacagatttgttta
gaagctttcacgtggacagatggtgaagcagtatcaaaagttttgtccttttgtgctagt
gtgattcttctaggaatctcagctaagaatgttcaactccgagagtttgtttctaaagat
ctgttctctgcaattatcaaaggcttggcgctcgagtcaaatgcagttatcagtgctgat
ctagttggtttctgtcgagaaatattcatgcatctctgtgatagagatccagctccaagg
caggttctgctttctctcccttgtattaaaccccaggatttggttgcctttgaagaagct
ttgaccaagacagctagccctaaggaacaaaagcaacatatgaagagcttgcttttatta
gctactggaaacatgctaaaagcgatagctgctcagaagagtgtaaacattatcacaaat
gttacaatgaggcctcgcagctcggtaaatgctccagaaaccagaattgatgagggggat
actataggattggcagccattttgtga
DBGET
integrated database retrieval system
