Populus alba (white poplar): 118053568
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Entry
118053568 CDS
T07314
Name
(RefSeq) septin and tuftelin-interacting protein 1 homolog 1
KO
K13103
tuftelin-interacting protein 11
Organism
palz
Populus alba (white poplar)
Brite
KEGG Orthology (KO) [BR:
palz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
palz03041
]
118053568
Spliceosome [BR:
palz03041
]
Complex C
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-SnRNP related factors
118053568
Other components
Complex C specific factors
118053568
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
GCFC
TIP_N
G-patch
G-patch_2
TMF_TATA_bd
Motif
Other DBs
NCBI-GeneID:
118053568
NCBI-ProteinID:
XP_034920771
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Position
13:complement(7324395..7327683)
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AA seq
866 aa
AA seq
DB search
MDDYQEGMERFGMENDFEDGRFINGEFYFKKQKEKRKQSKDDVLYGIFADYDSDDDYVSS
SRKRRKDSRKADLTKPVNFVSTGTVMPNQEIDKNLRDKNSDVMFAAADDNRPGIGSGFNT
GLGFHSGLGDFNGVKKSEDFEDDGRDEAEDNFLPTEFGRRIKEGAERREQERMEKKAKGV
GKNKEVKDGDVGVFEKHTVKGIGMKLLEKMGYKGGGLGKNQQGIVAPIEAKMRPKNMGMG
FNDFKETSAKVPQFEEKETVSQSQGQMVGRMKEKLWLKGKKKQKQEKYITADELLAEKEE
QGFEVFQKVIDMRGPQVRVLTNLENLNAEEKAKENDVPMPELQHNVRLIVDLAELDIQKI
DRDLRNERETAMSLRQEKEKLETEAARQKKQLDNVEEIMGVLSHIEEQKSSGTLTLDSLA
KYFTDIKRKFAEDYKLCNLSCIACSYALPLFIRVFQGWDPLRNPLHGLEVVELWKNVLQG
EESSDIWDEVAPYAQLVTEVVLPAVRISGINTWEPRDPEPMLRFLESWENLLPAAVVQSI
LDNIVMPKLSSAVDSWDPRRETVPIHVWVHPWLLQLGLKLEGLYQMIRMKLSMVLDAWHP
SDASAYTILSPWKTVFDAASWENLMRRFIVPKLQVALQEFQINPANQKLDQFYWVMSWAS
AVPIHLMVDLMERFFFSKWLQVLYHWLCSNPNLQEVHKWYIGWKGLLPQELQAHENIRYQ
FTLGLNMIDRAIEGVEVVQPGLRENLSYIRAQEQRQFEAQQRAAMHSQYQTAAGTGSTTQ
MGGFGGGAVEMTLKEVVEAHAQHHSLLFKPKPGRMHDGHQIYGYGNMSIYVDPIHERLYV
QKEEDWLLTNLDNLLEMHNNSLKKRR
NT seq
2601 nt
NT seq
+upstream
nt +downstream
nt
atggatgattaccaggagggaatggaaagatttgggatggagaatgacttcgaagacggc
cgatttataaatggagagttctactttaaaaaacagaaagaaaaacgaaagcaatccaaa
gacgatgttctttatggtatctttgcggattatgactccgatgatgattatgtttcctcc
tcgcgaaagaggagaaaagactcccgaaaagctgacctcactaagcctgtcaattttgtc
tccacaggtactgttatgcctaaccaagagattgataagaatttgagagacaagaacagt
gatgttatgtttgctgctgctgatgataacagacctggaatagggtctggttttaatact
gggttagggtttcattcagggcttggtgattttaatggggttaaaaagagtgaggatttt
gaggatgatggtcgtgacgaggctgaagataactttttgccaacagagtttgggagaagg
ataaaggagggggcagaaaggagagagcaggagagaatggagaagaaagcaaaaggagtg
gggaaaaacaaggaagtgaaagatggggatgttggggtgtttgagaagcatacagtaaaa
ggaattgggatgaagttgttagagaaaatgggttataagggaggtggattggggaagaat
cagcaaggaattgtagccccaattgaagcaaagatgaggccaaaaaatatgggaatgggg
ttcaatgattttaaagaaacatcagctaaggtgcctcaatttgaggagaaggaaactgtg
agccaaagccagggtcagatggtggggagaatgaaggaaaagctatggttgaagggtaag
aagaagcagaagcaggagaagtatataacagcagatgaattgttggcagagaaggaagaa
caaggttttgaggtttttcagaaggtgattgatatgcgagggccgcaggtgagggtgctg
acaaatctggagaatctgaatgcagaagagaaggcgaaggagaatgatgttccgatgcca
gagcttcagcataatgtgaggttgatagtggatttggcagagcttgatatacagaagatt
gacagggatctgaggaatgaaagggagactgctatgagcttgcggcaggagaaggagaag
ttggaaacagaggcagcacgccagaagaagcaattggataatgtggaggagatcatgggt
gtgctgagccatattgaggagcagaagtcttcaggaactttgaccttggattcactagca
aagtatttcacagacataaagcggaaatttgcagaagattataagctttgcaacttgtct
tgcattgcttgttcatatgctttacctttgtttatcagagtatttcagggctgggatcct
cttaggaatccattgcatggattggaagtagtagaattatggaagaatgtgctgcaaggc
gaggaaagtagtgatatatgggatgaagttgcaccttatgcacagttagtaacagaagta
gttttgcctgctgtaagaatatctgggattaatacttgggagcctagggaccctgaaccc
atgcttagatttttggagtcttgggagaatttgttgcctgcagcagttgttcagagcatc
ttggataatatagttatgccaaaattatctagtgctgtggactcatgggaccctcgtcgg
gaaactgttcccatacatgtttgggtacatccatggctgctgcagttgggattgaaattg
gagggcttgtaccagatgatacgaatgaagttaagtatggttcttgatgcgtggcaccct
agtgacgcatctgcttacactatcttatcaccttggaaaactgtgtttgatgcagccagt
tgggaaaatcttatgcgcagatttatagttcccaagttgcaggttgcattgcaggagttc
caaataaacccggctaatcagaagcttgatcagttctattgggttatgtcatgggcttca
gctgttccaattcatctcatggttgacttgatggagaggtttttcttttcgaaatggctg
caggttttgtatcactggctctgttcaaatcctaacttacaagaggttcataaatggtac
attggttggaagggacttcttccacaagagcttcaggcacatgaaaatattcgttatcag
tttactcttggactcaacatgattgatcgagctattgaaggtgtggaagtggtccaacct
ggtctgagggagaacctcagttatattagggcacaggagcagaggcagtttgaggcccag
caaagagctgcaatgcattctcaatatcaaactgccgctggcacgggaagcacaacgcaa
atgggtggttttggtggtggtgcagttgagatgactttgaaagaggttgttgaggcccat
gcacaacatcacagcttgctctttaagccaaaacctggcaggatgcatgatggtcaccag
atatatgggtacggtaacatgagcatatatgtggatccaatacatgaaaggttatatgtc
cagaaggaggaagattggttactgacaaaccttgataatttgcttgagatgcataataat
tctcttaaaaagagacggtga
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