Populus alba (white poplar): 118053666
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Entry
118053666 CDS
T07314
Name
(RefSeq) nuclear pore complex protein NUP85
KO
K14304
nuclear pore complex protein Nup85
Organism
palz
Populus alba (white poplar)
Pathway
palz03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
palz00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
118053666
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
palz03019
]
118053666
03036 Chromosome and associated proteins [BR:
palz03036
]
118053666
Messenger RNA biogenesis [BR:
palz03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
118053666
Chromosome and associated proteins [BR:
palz03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
118053666
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nucleopor_Nup85
Motif
Other DBs
NCBI-GeneID:
118053666
NCBI-ProteinID:
XP_034920870
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Position
18:complement(4091258..4099194)
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AA seq
721 aa
AA seq
DB search
MPDVAADSAASASGGELVPFVPDTEIAVVYPLHHGLKPPISRVSISWARGNNLRVSLLRN
PPSNSDSDGEIGGKVVEVNLDSGAADVREPAQWRRIAYGSVTPFALLQSRKNSASILSKL
QSSPSPFHLDWWEYVMEYSKDIKELLGNPKSNYNPLIEDPKEVLKKGEEPTSLKAAWELM
EMFYADKLCQSWLPERLVDWLADYDCLLSGDQPAVHSKLVEFQGTLVTLQVIEDDPKYWE
VISSALAVGWLEIVVKLLRLHGSYQLDQIGLRETENGLVETVAVLISMMPRMRPELKNGK
LGECFKAKPDFVKAWEKWREQITKLDSSAFWVLCDHRQTREGLKNLIQIMLGSIRILCTA
TSHWIELYISHFLFIRPFTVGFESMYNLAQKCIEMKPMSSPHKLLRLIIGIIGENTEVVL
AECSRGFGPWMVTHAIELLTARSDQADILLHKEHDDIGGISMEELHRLVYAQVLTSHFLT
WQIAPVYLTSCMRQGMSLLEVLLYRQPAQHNQLLLKNLEICRLYELDHVSSNIMKIAGVY
HWKHGRKGLGVFWLQQARDEFLLNKIAQQLFDSVGKSISGESFKQWEGLIELLGSESKPA
GNLEFLHKYRDFKKLLQQVCDRKTPDAARHASDLLMLLMKNPSTPQRFWLPLLYDSLTLL
SWQGRPLLNVSQTNLLLNKLQELSMASLRPGVVATDLPAEALDSVRLALATNLGRAILEE
Q
NT seq
2166 nt
NT seq
+upstream
nt +downstream
nt
atgcctgacgtcgcagcggattctgcggcttctgccagcggtggcgagttagtcccattc
gtgccagacactgaaatcgccgtggtgtacccgcttcaccacggcctaaaacctccaatc
tctcgcgtctcaatctcctgggcccgaggaaacaatcttcgcgtgtcattactccgtaac
ccgccttccaattccgactccgacggagaaattgggggaaaagttgtggaggtaaatctc
gacagcggagccgccgacgtcagagaaccagcgcagtggaggcgcattgcctacggctct
gttacgcccttcgcgctccttcaaagtcgcaagaattcagcttcaattttatctaaatta
caatcaagtccctctccatttcaccttgactggtgggagtatgtaatggagtacagcaag
gacataaaagaactacttgggaatccgaagtcaaattataatcctttaattgaagatcct
aaagaagttttaaagaaaggtgaggaaccaacgagcttaaaggcagcatgggagctgatg
gaaatgttttatgcagacaaattatgtcagagttggttgccagaacgccttgtcgattgg
ttggctgattatgattgcctgttatcaggtgaccagccagctgttcattcaaaacttgtg
gagtttcaagggacactagttaccttacaggtcattgaagatgatcctaaatattgggag
gtgatatcatctgcactagcagttggttggctagagattgtggtgaaacttttgcgcttg
catggatcttatcaactggatcagattggccttagagagacagagaatgggctagttgag
actgtagctgttctaatttcaatgatgccacgcatgcgtccagaattaaaaaatggaaaa
ttaggtgaatgctttaaagccaaacctgattttgtgaaggcatgggagaaatggcgagaa
caaataactaagctggattccagtgcattctgggttctatgcgatcaccgtcaaaccagg
gagggcttgaaaaatctgatccagatcatgctgggaagcatcaggattctctgcactgca
acatcccattggatagagctgtatatatctcacttcctgttcataaggccattcactgtt
gggtttgaaagcatgtacaacctagctcagaaatgcattgagatgaaaccaatgtctagt
ccacataagctgctgcggctaataattggaattattggggaaaatactgaggttgtattg
gctgaatgctcaagagggtttggtccttggatggtgactcatgccatagagttattgact
gctaggagtgaccaagcagatattcttttacacaaggagcatgatgacatagggggaata
agtatggaagagctccatcgtcttgtctatgctcaagttctaacttctcacttcttgact
tggcaaattgctcctgtttacttgacatcgtgtatgaggcaaggaatgagtttgttggag
gttttattatacaggcagcctgcccaacacaatcaattgttgcttaagaatttagaaatt
tgccgtctgtatgaactcgaccatgtcagctcaaacattatgaagattgctggagtgtac
cactggaagcatggtaggaaaggtttgggagttttctggcttcagcaagctcgggatgaa
tttctccttaacaagattgcccagcagttgtttgattctgttggaaagtcaatctctggt
gaaagcttcaagcaatgggagggtttaattgaattgttgggttcggaatcaaagcctgct
gggaatcttgagtttctgcacaagtatagggatttcaagaaattgctacagcaggtttgt
gataggaaaactccagatgctgctcggcatgcttctgacttgctcatgttgcttatgaag
aacccttctactcctcaacgtttctggctgcctcttctttatgattctttgacactgctt
agctggcaagggcgacctttgctaaatgtctctcaaacgaaccttttgttgaataaactg
caagaattgtccatggcaagcctgcgtccaggcgttgttgccactgacttgccagcggag
gcattagactctgttaggctggcccttgctacaaatcttgggcgtgccatcttagaagaa
cagtga
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