Populus alba (white poplar): 118053910
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Entry
118053910 CDS
T07314
Name
(RefSeq) DNA-directed RNA polymerase I subunit 2
KO
K03002
DNA-directed RNA polymerase I subunit RPA2 [EC:
2.7.7.6
]
Organism
palz
Populus alba (white poplar)
Pathway
palz03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
palz00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
118053910
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
palz03021
]
118053910
Enzymes [BR:
palz01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
118053910
Transcription machinery [BR:
palz03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
118053910
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_3
RNA_pol_Rpb2_7
RNA_pol_Rpa2_4
RNA_pol_Rpb2_2
CSPP1_C
Motif
Other DBs
NCBI-GeneID:
118053910
NCBI-ProteinID:
XP_034921198
LinkDB
All DBs
Position
1:complement(3119459..3136853)
Genome browser
AA seq
1173 aa
AA seq
DB search
MAKKGGEFKELEELVRHHIDSFDYMVDRGLEIMLDNIKPVRIYDPHTDTSLSLYLSNPRI
NAPIRDVRSRTTRQRLLPFECRQAKVSYTGKFEADVCFQYDGRPVIREKYNFGQFPIMLK
SKLCYLRSADPQQLVSLKEEASEVGGYFIMNGIERVFRCLIMPKQNYPMSMTRGSYRERR
EGHTDKAVVIRCVREYQSSLTDHSSVTVRLYYLRNGSARVGFWVRGREYLLPVGIVLKAL
VETTDREIYENLTSYYDEKYEKVKGAVGSQLLGERAKIILDEVRDASLFTQDDCLQHIGE
HFQPVVDELENKTPYTVAHAVLKDYVFVHLPNFHDKFSLLIFMLQKLFSFVDQTSAPDNP
DSLQNQDILLPGHLMTIYLKEKLEDWLRKAKSLVQDELTKNNTFNFLAVGDVRKVMDKNS
PVTVSTAVESMLRSGRLATQTGLDLQQRAGYTVQAERLNYLRFLSFFRAVHRGASFAGGR
TTSVRKLLPESWGFLCPVHTPDGEPCGLLNHMTCSCRVTSYFDSQGVVKDFFDIRKSILG
VLTSLGMIASLPKLAQAGPPKALSVLLDGRVIGSLPSSEIEKVVAHLRRLKVSATSAIPD
DMEVGYVPLSIGGAYPGLYISTYPSRFIRPVRNISIPCEERQDIELIGPFEQVFMEIKCP
DGGNGGRSNAFPATHEEIHPTNMLSVVANLTPWSDHNQSPRNMYQCQMAKQTMAFSLQSL
RFRADQKIYHLQTPQTPIVRTGAYTKYSIDEHPTGTNAIVAVLAYTGYDMEDAMILNKSS
VDRGMFHGQIYQTETIDLSDEGSRSDRSHRRFRRSNTDRSSHSLIDSDGLPYVGQIINPN
EPYCSIYNDITNTSKPKYRKGSEPAIVDYVAVDTKSKKHLQKVNIRFRHPRNPIIGDKFS
SRHGQKGVCSQLWPDIDMPFSGVTGMRPDLIINPHAFPSRMTIAMLLESLAAKGGSLNGN
FVDATPFASTVRASNTGEDKSEPESLVDELGKMLKSKGFNHHGVEVLYSGVYGTELTCEI
FIGPVYYQRLRHMVSDKFQVRSTGPVDQITRQPIKGRKRGGGIRFGEMERDSMLAHGAAY
LLHDRLHTCSDYHIADVCSICGSILTTHYQPQRRIVRDIGGLPPVKAPKKVVCHACQTSK
GIETVAMPYVFRYLAAELAAMNIKMTLHLNDGA
NT seq
3522 nt
NT seq
+upstream
nt +downstream
nt
atggcgaagaagggtggagaattcaaggagctggaagagctagtgaggcaccacatagat
tcctttgattacatggtggatagaggactggaaatcatgttagataacatcaagcctgtc
agaatttatgatcctcacactgataccagtctctcactatacttgagtaaccctcgaata
aatgctccaataagggacgttcgttcaaggacaactcgtcagaggctacttccttttgaa
tgtcgacaggctaaggtttcgtatactgggaagtttgaggcggatgtttgctttcagtat
gatggtagaccagttatcagagaaaagtataattttgggcagtttcctataatgttgaag
tcaaagctttgttacttgcgaagtgctgatccccaacagcttgtttccttaaaagaagag
gcgtcagaagtgggtggttacttcattatgaatgggattgagagagtttttcgatgtcta
attatgccgaagcagaactatccaatgagtatgacgcgaggttcatatcgtgaacgaagg
gaaggacatacagataaagcagttgttataaggtgtgtaagagaatatcaatcttcatta
acagatcactcttcagtaacagttagactatattatcttcgcaatggaagtgccagagtt
ggattttgggtaagaggaagggagtacttgcttcctgttggcattgtgttgaaggccctt
gttgagaccacagaccgggaaatttatgagaatctgacaagttactacgatgagaaatat
gagaaggtaaaaggagctgttggctctcagcttctaggtgaaagggccaaaattattctt
gatgaagttcgggatgcgtctcttttcactcaggatgactgtctgcagcatattggggag
cactttcaacctgttgtggatgagttggaaaacaaaactccatatactgtggcccatgct
gttttgaaagattacgtgtttgttcatcttcctaattttcatgacaaatttagtctgctg
atctttatgttgcagaaacttttctcttttgtcgatcagacttctgcaccagacaaccca
gattccttgcaaaatcaggacatcttacttcctgggcacctgatgaccatttatctcaag
gagaaactagaagactggttgcgcaaggcgaaatcacttgttcaagatgagctaacaaaa
aataacacttttaatttcttggcagtaggagatgtcaggaaggtcatggataaaaattcc
ccagtaacagtcagtacagctgtggagtctatgttgagatctggaagactggctacacaa
acaggtcttgatttgcagcagagggctggttacactgttcaagcagagaggctcaattat
ctgcgctttctttcttttttccgtgctgtacatcgaggagcttcctttgctggtggtcgc
acaacaagtgtgcggaagttgcttcctgaatcatggggttttctttgcccagtccacaca
cctgatggggagccatgtgggttgctgaaccacatgacttgttcttgtcgtgttacatca
tattttgattcacaaggagttgtgaaagatttttttgatataagaaaatctatccttggt
gttttgaccagtcttggaatgattgcttcattgccaaagcttgctcaagctggccctcct
aaagctctttctgttcttttggatggtcgtgtcattggctctcttccttccagtgaaatc
gagaaagttgttgctcatttgcgaagattaaaagtgtcagcgacttcagcgattcctgat
gatatggaagttggatatgttcctttgagcattggtggtgcatatccaggtttatacatc
tccacatatccttccagatttattcgccctgttagaaatatttctatcccttgtgaggaa
cgtcaagatattgaacttattggaccatttgaacaggtttttatggaaataaaatgtcca
gatggtggaaatggtggaagaagtaatgcctttcctgcaactcatgaagaaattcaccca
acaaatatgctcagtgtggttgctaatctaacaccttggtcagatcataatcaaagtcca
cgaaatatgtaccagtgtcagatggctaaacaaacaatggctttctctttacaatctctc
cgcttccgtgctgatcagaagatataccatcttcagactcctcaaactcccattgtacgt
acaggagcgtacacgaaatacagcattgatgagcatccaacagggacaaatgctattgtt
gcagtgcttgcatatacaggatatgatatggaggatgccatgatcttgaacaagtcctcc
gtagatcgtggcatgtttcatggacaaatataccagacagaaactatagatttatctgac
gagggcagcaggtcagatcgatcccacagaagatttaggaggagtaacactgataggtca
tcgcattccttgattgattcagatggacttccatatgttggtcagataataaatccaaat
gagccatattgtagcatttataatgacataacgaatacatcaaaacccaagtatcgaaaa
ggttcagagcctgctattgttgactatgtcgctgttgatacgaaaagcaagaagcacctt
cagaaggtgaatattcgttttcgtcatcctagaaaccctatcattggtgataagtttagc
agtaggcatggacagaagggtgtttgctcccagttatggccagatattgatatgccattt
tctggagttactgggatgcgtcctgatctgattatcaatccccatgcttttccttcaaga
atgacaattgcaatgcttttggaatcccttgctgccaagggaggtagcttaaatggaaac
tttgtagatgctacgccatttgctagtacagtgagggcatctaatacaggagaggacaaa
tcagaacctgaatcacttgttgatgaacttggcaagatgctaaaatctaagggctttaat
catcacggcgtggaggttttgtacagtggggtttatggaacagaactcacatgtgaaatt
tttattgggcctgtttattatcagcgccttcgccacatggtttcagacaaatttcaggtc
cggtcaactggaccagtcgaccagattaccagacagcctattaaaggaagaaagcgtggt
ggaggtattcgttttggagaaatggaacgagattcaatgcttgcccacggagctgcatac
ttgttgcatgataggctccatacttgttctgattatcacattgctgatgtatgttctata
tgcgggagcattctaacaacacattaccaaccacagaggcgaatagtgcgtgatattggt
ggattacctcccgtgaaggctcccaaaaaagtggtatgccatgcatgccaaacaagcaaa
gggatagaaactgttgcaatgccttatgtctttagatatttagctgccgaattagctgct
atgaacataaaaatgaccctccacttgaatgatggagcatga
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