Populus alba (white poplar): 118054303
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Entry
118054303 CDS
T07314
Name
(RefSeq) crossover junction endonuclease MUS81 isoform X2
KO
K08991
crossover junction endonuclease MUS81 [EC:3.1.22.-]
Organism
palz
Populus alba (white poplar)
Pathway
palz03440
Homologous recombination
palz03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
palz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
118054303
03460 Fanconi anemia pathway
118054303
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
palz03400
]
118054303
DNA repair and recombination proteins [BR:
palz03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
118054303
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ERCC4
WHD_MUS81
EME1-MUS81_C
HHH_8
DUF6429
DUF282
Motif
Other DBs
NCBI-GeneID:
118054303
NCBI-ProteinID:
XP_034921708
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All DBs
Position
3:complement(21467236..21474948)
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AA seq
670 aa
AA seq
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MQNQKRVLCSENEDLVSYMLQKRQELVESPKGLSENLEMTLSKAYSSVCCSTIPIKNLKD
LSQIKGVGKWIVRLMEGFFDNGSGSSEPEDLTKKGKRAQVAKRYLPQRNSVSYALLITLY
RETVNSKEFMHKQELIDAAEVSGLSRAPIVPEKGKGKPSQFGSSREWFSGWSCMTTLINK
GLVVKSSCPAKYMLTDEGRETARECLIRSRMEDPGDNLANLEGSSDLNMLNISDMESARP
DSARGATFASIALSRQKKSIDVPLESLERFMRMGYSKEKVLLAFSEVSETSQYKEISSLW
PAVLCHLREDLIYGVHSEPQTLTEDFRSTSTACTFSNGQVDPATKSNQMGSNCDGPNMPN
LTSACSTSRSFSMRACSSSEHAMKKSSSDRLDTNMNVLSLPPLSSGERFEDVYEVILILD
DREQFAIQCSRGRKLIECICKEHKIKIQVRRLPVGDGIWIARHKYLLSEYVLDFIVERKK
VDDLRSSIRDNRYRDQKLRLLRCGLKKLMYLVEGDPNSSEAAESIKTACFTTEILEGFDV
QRTNSLRDTLKKYAHLTQSITQYYSLLLPEDQSKSTRVCPPFDEFIKRCQDLEKMTVSDV
FAIQLMQVPQVTEETAVAVLNLYPTLLSLARAYSLLDGDVSAQEDMLRKQSSNAVTAVAS
RNIFQLVWGK
NT seq
2013 nt
NT seq
+upstream
nt +downstream
nt
atgcagaaccaaaaaagggtactttgctctgaaaatgaagaccttgtatcttacatgcta
caaaagaggcaagaattggtagaaagccctaaagggttatcagagaatttggaaatgaca
ctttccaaggcctatagcagtgtgtgttgttcaacgattcctatcaagaacctcaaggat
ttatctcaaatcaagggtgtaggtaaatggatagttaggctaatggaagggttttttgat
aacggttcagggagttctgaaccagaagacttgaccaaaaagggtaagagagcacaagta
gcaaaacgttatctgccacaaaggaattctgtgtcctatgccttgcttataaccctgtac
agggagactgtaaacagtaaagaatttatgcataaacaagagcttattgatgctgctgaa
gtgagcggactttctcgggcaccaattgtgccagagaaggggaaagggaaaccttcacaa
tttggaagttcaagggagtggttcagtggatggagttgcatgacgacattgataaacaaa
ggattggttgttaaatcaagttgccctgccaaatacatgctgactgatgaagggcgggaa
acagcacgtgaatgcctcattagatctcgtatggaggatcctggagataatttggctaat
ttagaggggtcttctgatctgaacatgcttaatatatcagatatggagtctgctcgccct
gattcagctaggggagcgacatttgcttccattgccttaagtaggcagaagaaatcaata
gatgttccccttgaatcacttgagaggtttatgcgcatggggtactccaaagaaaaagtt
cttcttgctttttctgaagtctcagaaacttcccagtacaaggagatatcatcactttgg
ccagctgttctgtgtcatcttcgagaagatctcatttatggtgtgcattcagagcctcaa
actctaacagaagacttccgatcaacatcaactgcttgcacattttcaaatggtcaagtt
gaccctgctactaagagcaatcaaatgggttccaattgtgatggtccaaatatgccaaat
ctaacttctgcctgttccacttccagatcattttctatgagagcttgctcatcatctgag
catgctatgaagaagtcatcttcggaccgcttggatacaaatatgaatgttttaagtttg
ccacctctgagctctggggagagatttgaggatgtatatgaagttatcctaatattggat
gatcgagagcagtttgccattcagtgttcgaggggtaggaaacttattgagtgcatttgc
aaggagcataaaatcaaaatacaggttaggcggttaccagttggagatggaatatggata
gctcgccataaatatctcctcagtgaatatgttcttgattttattgttgagagaaagaaa
gttgatgatctgcgttcttcaataagggataatcgttatagagatcagaaactgaggctt
cttagatgtggactcaagaagctgatgtatcttgttgaaggtgatccaaattcttctgaa
gctgctgagagcatcaaaacagcctgttttacaacagagatactggagggctttgatgtt
cagagaacaaattccttgcgtgatactctgaagaaatacgctcatcttacccagtcaata
acccaatattatagtttactgctgcctgaggaccagtccaaaagcaccagggtttgtcct
ccttttgatgaatttatcaaaaggtgccaagatttggagaaaatgacagttagtgatgta
tttgccattcagctcatgcaggttccacaagtgaccgaggaaactgctgtggctgttctg
aatttgtacccaacacttctatctctagcccgtgcctattctcttcttgatggtgatgtt
tctgctcaagaggacatgcttagaaagcagagtagcaatgctgtcactgcagttgccagt
aggaacatcttccaattagtctggggaaaatga
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