Populus alba (white poplar): 118054520
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Entry
118054520 CDS
T07314
Name
(RefSeq) chaperonin CPN60-2, mitochondrial
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
palz
Populus alba (white poplar)
Pathway
palz03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
palz00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
118054520
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
palz03019
]
118054520
03110 Chaperones and folding catalysts [BR:
palz03110
]
118054520
03029 Mitochondrial biogenesis [BR:
palz03029
]
118054520
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
palz04147
]
118054520
Enzymes [BR:
palz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
118054520
Messenger RNA biogenesis [BR:
palz03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
118054520
Chaperones and folding catalysts [BR:
palz03110
]
Heat shock proteins
HSP60 / Chaperonin
118054520
Mitochondrial biogenesis [BR:
palz03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
118054520
Exosome [BR:
palz04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
118054520
Exosomal proteins of other body fluids (saliva and urine)
118054520
Exosomal proteins of breast cancer cells
118054520
Exosomal proteins of colorectal cancer cells
118054520
Exosomal proteins of bladder cancer cells
118054520
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
CO_dh
Motif
Other DBs
NCBI-GeneID:
118054520
NCBI-ProteinID:
XP_034922038
LinkDB
All DBs
Position
3:19190291..19195083
Genome browser
AA seq
574 aa
AA seq
DB search
MHRFTSSLASKARIARSTTKQIGSRLSWSRNYAAKDIRFGVEARAVMLKGVEELADAVKV
TMGPKGRNVVIEQSYGAPKVTKDGVTVAKSIEFKDKVKNVGASLVKQVANATNDAAGDGT
TCATVLTRAIFAEGCKSVAAGMNAMDLRRGISMAVESVVTNLKSRTRMISTSEEIAQVGT
ISANGEREIGELIAKAMEKVGKEGVITIQDGKTLSNELEVVEGLKLDRGYISPYFITDQK
TQKCELDDPLILIHDKKVSNLHAVVKVLELALKRQRPLLIVAEDVESEALATLILNKLRA
GIKVCAIKAPGFGENRKATLQDLAVLTGGEVITEELGLNLEKVDLDMLGSCKKVTVSKDD
TVILDGAGDKKSIEERCEQIRSAVESSTSDYDKEKLHERLAKLSGGVAVLKIGGASEAEV
GEKKDRVTDALNATKAAVEEGIVPGGGAALLYASKELDKLQTANFDQKIGVQIIQNALKT
PVHTIATNAGVEGAVVVGKLLEQDNPDLGYDAAKDEYVDMVKAGIIDPLKVIRTALVDAA
SVSSLMTTTEAVITELPKDESDAPAMGPGMGMDY
NT seq
1725 nt
NT seq
+upstream
nt +downstream
nt
atgcaccgcttcacttctagcctcgcttccaaggctcggattgccaggagcaccacaaaa
caaattggaagtaggttgagttggagcagaaactatgctgccaaggacataagattcggt
gtggaggctcgtgctgtgatgcttaagggtgttgaagagctagctgatgctgtcaaagtc
accatgggccctaagggtcgcaatgtggttattgaacaaagctatggtgcccccaaagtg
actaaggatggtgtgactgtcgcaaagagcattgagttcaaggataaagtcaagaatgtt
ggtgctagcctcgtgaagcaggttgcaaatgccacgaatgatgctgcaggcgatgggacc
acttgtgcaacggtcctcactcgagcaatatttgctgaagggtgcaagtcagttgcagca
ggaatgaatgcaatggacctaagacgtggtatcagcatggctgtggaatcagttgttacc
aatttgaaaagcagaacaagaatgatcagcacatccgaagaaattgcacaagttggtaca
atatcagcaaatggggagagagaaattggtgagttgattgcaaaggccatggagaaggtt
gggaaagagggagttataacaattcaagatgggaaaacattatctaatgagttggaagtt
gttgagggattgaagcttgacaggggctatatatccccttatttcatcacggaccagaaa
acccaaaaatgtgaattggatgaccctctcattctgatccatgacaagaaagtctcaaat
ttgcatgctgtggtgaaagtactagagttggctttaaagagacaaaggcccttgctgatt
gttgctgaagatgtggagagtgaggcactggcaacacttattttaaataagcttcgtgct
ggaatcaaggtttgtgccattaaggcccctggttttggagagaacaggaaggctacatta
caggatcttgctgtcctcacaggaggcgaagttataactgaagagcttggcctcaatctt
gaaaaggtggatttggatatgcttggcagttgcaaaaaggttacggtatcaaaggatgac
actgttattcttgatggtgctggtgacaagaagtccattgaagaaagatgtgaacagatc
cgatctgcagtagagtcgagtacttctgactacgacaaagagaagttgcatgaaagactg
gcaaagctttctggtggtgttgctgtgctgaagattggaggagctagtgaagctgaagtt
ggtgagaagaaagatagagttacagatgccctaaatgccacaaaggctgctgtggaagag
ggtattgtgccaggaggtggtgctgcacttctttatgcatcaaaagagttggataagctg
caaactgccaactttgaccagaagatcggtgttcaaattattcaaaacgccctgaagacc
cctgtgcatacaattgctactaatgcgggagtcgagggagctgttgttgttggtaagcta
ttggagcaggacaaccctgatctagggtatgatgctgccaaagatgaatatgttgatatg
gtgaaagctggcattattgacccgctgaaagtaattagaactgctttggtcgatgccgcc
agtgtctcctcgttgatgacaacaactgaggctgttataactgagcttccaaaggatgaa
agtgatgctccggcaatgggtccaggcatgggcatggattactga
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