Populus alba (white poplar): 118054533
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Entry
118054533 CDS
T07314
Name
(RefSeq) probable pectate lyase 8
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
palz
Populus alba (white poplar)
Pathway
palz00040
Pentose and glucuronate interconversions
palz01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
palz00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
118054533
Enzymes [BR:
palz01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
118054533
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Gene cluster
GFIT
Motif
Pfam:
Pectate_lyase_4
Beta_helix
PDGLE
Motif
Other DBs
NCBI-GeneID:
118054533
NCBI-ProteinID:
XP_034922061
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Position
3:complement(19301021..19305925)
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AA seq
452 aa
AA seq
DB search
MTMAVPQKWVCVFSAVIVLLFVGVVATSRPDVVGISALTRNVEAEKEQSSSNSTMAARSQ
EEADAFNEKAVAADPEEVVSMVEMNIRNSTERRRLGYFSCGTGNPIDDCWRCDPNWHKNR
KRLADCGIGFGRNAIGGRDGRFYVVTDSSDHDPVNPRPGTLRHAVIQDAPLWIVFKRDMV
IQLKQELIMNSFKTIDGRGVNVHIANGGCITIQFVTNVIIHGLHIHDCKPTGNAMVRSSP
SHYGWRTMADGDAISIFGSSHIWVDHNSLSNCADGLVDAVMGSTAITVSNNHFTHHNEVM
LLGHSDSYTRDKQMQVTIAYNHFGEGLIQRMPRCRHGYFHVVNNDYTHWEMYAIGGSAEP
TINSQGNRYNAPANPFAKEVTKRVDTAPGNWKNWNWRSEGDLLANGAYFTPSGAGASASY
ARASSLGAKSSSMVGAMTANSGVLGCRRGHQC
NT seq
1359 nt
NT seq
+upstream
nt +downstream
nt
atgacaatggcggtgcctcagaaatgggtttgtgtgttttctgctgtgattgtattgttg
ttcgttggtgtcgtggctacttcaagacccgatgttgttgggatctctgctcttaccagg
aacgtagaagcagagaaggaacagagctcaagcaactcaactatggcggccaggtctcaa
gaagaggctgatgcatttaacgagaaagcagttgctgctgatcctgaagaagtggtttca
atggttgagatgaacatccgcaacagtactgaaaggaggaggttgggctacttctcttgt
ggaacaggcaatcctattgatgattgctggcggtgtgaccccaactggcacaagaaccgc
aagcgccttgctgactgtggcattggttttggcagaaacgccattggtggcagggatggt
cgcttctatgttgttactgattctagcgaccatgaccctgtgaacccaaggcctggaact
ttgcgccatgccgtgatccaggacgctcctctatggatcgtgttcaaaagggacatggtg
attcaattgaagcaggaacttatcatgaacagctttaagaccatagatggccgtggtgtc
aacgttcacattgctaatggtgggtgcatcactatccaatttgttaccaatgtgatcatt
catggtctccacattcatgactgcaagcccactggcaacgctatggtgcgtagctcacca
tctcattacggatggaggacaatggctgatggcgatgccatctctatttttggatcaagt
catatctgggtggatcacaattccctctctaactgcgctgatggcctggttgatgctgta
atgggttctactgccatcaccgtctccaacaatcacttcacccaccataatgaggtaatg
ctcctgggccacagtgactcttataccagagacaagcaaatgcaagtgaccattgcttac
aaccattttggagagggactgatccagagaatgccaaggtgtagacatgggtacttccat
gtagtaaacaatgactacactcactgggaaatgtatgccatcggtggcagtgcagaaccc
accatcaacagccagggcaacagatataatgctccagccaacccttttgcaaaggaggtg
acaaagagggtggatacagctccaggcaattggaaaaactggaattggaggtcagaagga
gacctgttggctaatggagcttacttcactccatccggggctggagcttcagctagctat
gctcgcgcttcaagcttgggtgccaagtcttcttccatggtcggagcaatgactgctaat
tccggtgttcttggctgccgcaggggccatcagtgctag
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