Populus alba (white poplar): 118055128
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Entry
118055128 CDS
T07314
Name
(RefSeq) threonine--tRNA ligase, mitochondrial 1
KO
K01868
threonyl-tRNA synthetase [EC:
6.1.1.3
]
Organism
palz
Populus alba (white poplar)
Pathway
palz00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
palz00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
118055128
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
palz01007
]
118055128
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
palz03016
]
118055128
Enzymes [BR:
palz01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.3 threonine---tRNA ligase
118055128
Amino acid related enzymes [BR:
palz01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
118055128
Transfer RNA biogenesis [BR:
palz03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
118055128
Prokaryotic type
118055128
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2b
HGTP_anticodon
TGS
tRNA_SAD
tRNA-synt_His
AglB_core-like
Motif
Other DBs
NCBI-GeneID:
118055128
NCBI-ProteinID:
XP_034922839
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All DBs
Position
8:10162512..10172833
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AA seq
715 aa
AA seq
DB search
MCICSRLLSPFRRFSSSSPLLLSISPRRLLSFSSSTAMAVSKSHARDEEYLNIAIPKRIQ
LFQSIQSQQLSRLQSLPHDFIKITLPDGTVKEGKRWESSPMDIAKEIGKSVAGNALISQV
NGVLWDMNRPLEDDCELKIFNFESDEGRDTFWHSSAHILGQALEMEYGCKLCIGPCTTRG
EGFYYDAFYGELGLNDDHFKKIDAAALKAVAEKQPFERIEVSREQALEMFSDNNFKVEII
KDLPADKTITVYRCGPLVDLCRGPHIPNTSFVKALACLKASSAYWRGNRDRESLQRVYGI
SYPDKKRLQEYKQFLEEAKKYDHRLLGIKQELFFCHPLSPGSWFFLPHGTRVYNKLMQFI
KDEYRRRGYEEVKSPNIYNMKLWETSGHAANYKENMFLLEIENQEFGLKPMNCPGHCLMF
QHRVRSYRELPLRLADFGALHRNEASGALTGLTRVRRFQQDDAHIFCRKSQIKDEVRGVL
EFIDYTYGKFGFTYELKLSTRPEKYLGVLETWDEAEKALTEALDEFGKPWKIDEGDGAFY
GPKIDISVSDALKRKFQCATLQLDFQLPDRFKLEYSAEDEAKSEAPVMIHRAILGSVERM
FAILLEHYKGKWPFWLSPRQAIVCPVSEKSQSYALKVRDQIHEAGYFVDVDATDRKIQKK
VREAQLAQYNYILVVGEEESKTGQVSVRVRDNAEHSVMSIESLLGLFKELVADFR
NT seq
2148 nt
NT seq
+upstream
nt +downstream
nt
atgtgcatatgttcccggctgctctcacctttccgccgtttctcatcctcctctcctcta
cttctttctatttctcctcgccgtctcctctccttctcctcttccacggcaatggctgtc
tccaagtctcacgcaagagatgaagaatatctcaatatagcaatccctaaacgcatccag
ctcttccaatccattcagtctcaacaactctcccgcctccaatcccttccccacgacttc
atcaagattactttgcctgacgggacagtgaaggaaggaaaaagatgggaatcgtctcct
atggatatcgcaaaggagattgggaagagtgtggctgggaacgcgttgatctctcaagtc
aacggagtgttgtgggacatgaataggcctttagaggatgattgtgagctcaagattttt
aattttgaaagtgacgaaggacgcgacaccttttggcattccagtgctcacattcttggc
caggctcttgagatggagtatggttgcaagctttgcattgggccctgtactactagagga
gagggattctattatgatgcattctatggtgaattgggattgaatgatgatcacttcaag
aagattgatgcagctgcgttgaaagctgttgcggagaaacaaccttttgagcgcattgaa
gtatcgcgggaacaggcacttgagatgttttcagacaataattttaaggttgaaataatc
aaagatctgcccgcagacaaaactataactgtatacagatgtggcccgttggtagatttg
tgtcgtgggcctcatatacctaacacctcctttgtgaaagctcttgcatgcttgaaggct
tcatcggcttattggagaggcaatagagatcgtgaaagtttacaaagagtgtatggaatt
tcttatcctgataaaaaacgtttgcaggagtataagcagttcttggaagaagcaaagaag
tacgatcacaggttgctgggtattaagcaggagttattcttttgtcatccactgagtcca
ggaagttggtttttccttccacatggaactcgggtttacaacaaactaatgcaatttata
aaagatgagtacagaagaagaggttacgaagaggttaagtctccaaatatttataacatg
aaactttgggagacatctggtcatgctgccaattacaaggagaatatgtttctgcttgag
attgaaaatcaagaatttggactgaaaccaatgaattgccctgggcactgtttgatgttt
caacatagagttcgttcatatagagaacttcctcttcgattggctgattttggggccttg
catcgcaatgaagcaagtggtgcactcactggactaacacgtgttcgaagatttcagcag
gatgatgctcacatattctgcaggaaatctcagataaaagatgaagtcagaggtgtctta
gaattcattgactatacttatggaaaatttggattcacttatgagctgaagctatctacg
aggccagagaaatacctaggagtcttggaaacatgggatgaagctgagaaagctcttaca
gaagcactggatgagtttgggaagccatggaagattgatgaaggcgatggtgcattttat
ggaccaaagatagatatcagtgtatctgatgcattaaagaggaaatttcagtgtgccaca
ttgcagcttgacttccagcttccagatcgttttaagttggaatattcagcagaggatgaa
gccaaaagtgaagcacctgttatgatacatagagcgatcctaggttctgttgagcgtatg
tttgctatactattggagcattacaagggcaagtggcccttctggcttagtccccgtcaa
gcaattgtctgccctgtgtctgagaaatcccagtcttatgcattaaaggtgcgggatcag
attcatgaagctggctattttgtcgatgtggacgcaaccgacagaaagatccagaaaaag
gtacgagaagctcagttggcacagtacaattatatactggttgttggcgaagaggaatcc
aaaactggacaggtgagtgtgcgggtgagagataacgctgagcattcagtgatgagtatt
gagagcctactcggactcttcaaggaattagttgcagatttccgttag
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