Populus alba (white poplar): 118055229
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Entry
118055229 CDS
T07314
Name
(RefSeq) probable methionine--tRNA ligase
KO
K01874
methionyl-tRNA synthetase [EC:
6.1.1.10
]
Organism
palz
Populus alba (white poplar)
Pathway
palz00450
Selenocompound metabolism
palz00970
Aminoacyl-tRNA biosynthesis
palz01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
palz00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
118055229
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
118055229
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
palz01007
]
118055229
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
palz03016
]
118055229
Enzymes [BR:
palz01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.10 methionine---tRNA ligase
118055229
Amino acid related enzymes [BR:
palz01007
]
Aminoacyl-tRNA synthetase
Class I (U)
118055229
Transfer RNA biogenesis [BR:
palz03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
118055229
Prokaryotic type
Other AARSs
118055229
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1g
tRNA_bind
Anticodon_3
tRNA-synt_1
Anticodon_1
tRNA-synt_1e
CoV_peptidase
Sublancin
Motif
Other DBs
NCBI-GeneID:
118055229
NCBI-ProteinID:
XP_034922945
LinkDB
All DBs
Position
1:complement(35510967..35517292)
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AA seq
800 aa
AA seq
DB search
MEDLNRTAPKLPIPGKRNILITSALPYVNNVPHLGNIIGCVLSADVFARYCRLRGYNAIY
ICGTDEYGTATETKAIEENSTPKQICDKYHAIHREVYKWFNISFDEFGRTSSPQQTEICQ
AIFKKLLDNNWLSENSMQQLYCDTCERFLADRLVEGNCPTEGCNYDSARGDQCENCGKLL
NPTELINPRCKQCKNTPRIRDTSHLFLELPLLKDKLVNYIESTSVAGGWSQNAIQTTNAW
LKEGLKPRCITRDLKWGVPVPLEEFKDKVFYVWFDAPIGYVSITSCYTPDWEKWWKNPEN
VELYQFMGKDNVPFHTVMFPSTLLGTGENWTLMKTISVTEYLNYEAGKFSKSKGVGVFGN
DAKDTNIPVEVWRYYLLTNRPEVSDTLFTWSDLQAKSNSELLNNLGNFINRVLSFLAKPP
GSGYGSVIPDAPGADSHPLTNKLAEEVGKYVDQYLEAMEKVKLKQGLKTAMSISSEGNAY
LQESQFWRLYKEDQPSCSIVVKTSLGLVYLLACLLEPFMPSFSVEVFKQLNLSPEQASLC
DEKGDMDKAKRPWEILPAGHKIGTPEPLFKELKIEEVEDYRKKFAGSQADRLEREEVEKA
SKLAEELKKKATVGGKKQQAKKPAGEAKSRGAVEPEISITRLDIRVGLIKKAQKHPDADS
LYVEEIDLGEGDCRTVVSGLVKYIPLEEMQNRKVCILCNLKPANMRGIKSEAMVLAASSS
DHTKVELVDPPQSAVVGERVTFPGFEGEPDDVLNPKKKVWETLQVDLQTNSDLVACYKDI
PLTTSAGVCKVATISNGSIR
NT seq
2403 nt
NT seq
+upstream
nt +downstream
nt
atggaagatctcaatcggacggccccgaagctccctatcccgggaaagcgaaacatactg
ataaccagtgccttgccttatgtcaataacgtccctcatctcgggaacatcatcggatgt
gtgttgagtgctgatgtttttgctcgatactgtcgtcttcgaggatataacgcgatttat
atttgtggaactgacgagtatgggactgcgactgagactaaagccatagaggagaattcc
actcctaaacaaatttgtgacaagtatcatgcgattcatagggaggtttataaatggttt
aatataagttttgatgaatttggacgtacgtcgagtccgcagcaaacggaaatttgtcaa
gcaatttttaagaaattgttagataataactggctttcggagaactcaatgcaacagctg
tactgtgatacatgcgaaagattcttagctgatcggcttgtggaaggtaattgtccaacg
gaaggatgtaattatgattctgcacgaggagatcagtgtgaaaattgtggaaagcttttg
aatcctacagagttaataaatcccaggtgcaagcaatgtaaaaacacaccacgaatccgt
gatacaagtcacttgtttcttgagcttcctctgctgaaggataaattagtaaactatatc
gagagcacatctgtagctgggggctggagccaaaatgctattcaaacaacaaatgcatgg
cttaaagaaggattaaaaccacgatgcattactagggatctgaagtggggtgttcccgtt
ccacttgaagaatttaaggacaaggtgttctatgtttggtttgatgctcctattggatat
gtctccattacttcttgctacactcctgattgggagaagtggtggaagaatccagagaat
gtcgagctgtatcagtttatgggaaaagacaatgtgccattccacactgtgatgtttcca
tctacgcttcttggaacaggtgaaaattggactttgatgaagactataagtgtaactgaa
tacttaaattatgaagcaggaaagttttccaagagtaaaggtgtaggagtgtttggtaat
gatgcaaaagatacaaatattcctgtagaagtttggagatattatttgctaaccaatagg
cctgaggtgtctgacacactatttacatggtctgatttgcaagcaaaaagtaacagtgag
ttgctgaataatttgggaaactttattaaccgagttctgagctttcttgctaaacctcca
ggttcaggatatggttctgttattccagatgctccaggggcagactctcatcccctgaca
aataaattggctgaagaagttggtaaatatgtggaccaatacctggaagccatggaaaag
gttaaattaaagcaaggattgaaaactgcaatgagcatttctagtgagggaaatgcatat
ctgcaagaaagccaattctggaggctttacaaggaagaccaaccttcttgttctatagtt
gtaaagacttcattgggtctagtatatcttctcgcatgtttgttagaacctttcatgcca
tctttctctgttgaggtcttcaagcagcttaatttgtcccctgaacaagcttcactatgt
gatgagaaaggtgatatggataaggcaaaaagaccttgggagatcctacctgctgggcac
aagattgggacaccagagcctttgttcaaggaactgaaaatagaagaagtggaggactac
aggaagaaatttgctggaagtcaggctgacagacttgagcgggaagaagttgaaaaagca
tctaagcttgctgaggaactgaagaaaaaagctacagttggtgggaagaagcagcaggcc
aaaaaacctgctggtgaagccaaatcaaggggcgctgttgaaccagaaatctccatcaca
agacttgatattcgtgttggcctaataaagaaagctcagaagcatcctgatgctgattcc
ctgtatgtggaagaaatcgacttgggtgaaggagactgtagaacggttgtaagtggactt
gtcaagtatatacctcttgaggagatgcagaatcggaaggtctgcatcctttgcaaccta
aagcctgcaaatatgaggggcatcaagtcagaggctatggttcttgctgcttccagtagt
gaccacaccaaggtcgaattggttgatccaccccaatctgcggttgttggagagagagtg
acattcccagggtttgaaggtgaacctgacgatgtcctaaaccctaagaagaaagtctgg
gagacactacaggtggatctgcaaactaacagtgacctggtagcctgctacaaagatatt
ccactaaccacatctgctggtgtgtgcaaggttgcaaccattagcaatggttccatcagg
taa
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