Populus alba (white poplar): 118055286
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Entry
118055286 CDS
T07314
Name
(RefSeq) uncharacterized protein isoform X1
KO
K18730
PERQ amino acid-rich with GYF domain-containing protein
Organism
palz
Populus alba (white poplar)
Brite
KEGG Orthology (KO) [BR:
palz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
palz03019
]
118055286
Messenger RNA biogenesis [BR:
palz03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
118055286
Surveillance factors
Other surveillance factors
118055286
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GYF
Motif
Other DBs
NCBI-GeneID:
118055286
NCBI-ProteinID:
XP_034923028
LinkDB
All DBs
Position
1:36362440..36370362
Genome browser
AA seq
1683 aa
AA seq
DB search
MTDGKPNLPDDLLLLSCKSTDERLSSFKDRGGIGEDKSLLSLPDDSKDQVTADNTIPLSP
QWLYAKPVDAKSSTTGASGETRASNSLSHGNSSDSNLKDNWRLDGSQDKKDRRRIAPDVE
SSRRWREEERDTGLLGRKDRRKEDHRADSVSARDISETRTLPSSDRWHDGNNRNSAHESR
RDSKWSSRWGPEEKEKDSRNDKRADVEKDEAHSDKQNFGTASRPTSERENDSRDKWRPSS
ERENDSRDKWRPRHRMEVHSGGPAAYRSAPGFGSERGRVESPNVPFAAGRGRSNNSGNLQ
IGRHLTASIGSIPVDKNHAFCYPRGKLLDIYRKHKTLPSFDTIPDGMELVSPLTQEIAIK
PLAFVAPDAEQEAVLGDIWLGKITSSGGLNNSFREKNESSNNNTAGIGEENVSFSVKTEE
IADSFGKITGNASGQGMGAEMFNASMAEEKDMHKDDKQKCVTTSGRALIDGFVPAVFKRD
ESSSVGESGLIDNVVDLKAFERQPVADVAFQNNLKLEDIESATSFEIGSQLPDDSSSLFD
FSSAQQNSRSHQFSFNINNDGHQFTGTIMPEELSLCYLDPQGVIQGPYLGIDIIAWLEQG
YFGTDLPVRLSDAPDGSPFHELGDIMPHLKLKPGCASSTSPSAKVQLSDDVGESLEGSTA
TSASLEYKVSAVREDQQRVSSGFEAIFSASGQSRVPDHGFLSGLEYSDDQRFQNVVTPDE
EIVFPGRPGSSGNPLMRDVADVQRFVPNPSTNPAILNEFSEAGMHTHQDEIVHPFGLSMS
ELSSNSNLRRAQSTNMASGMGDEFPAQVHAMDSYTEHDAALASHRSFDAVFDQSHYAETW
PEDYRKKLLTNPHIDLSSADARHLFHRQPEFNDFDQQHLMLQKMQKESQQQNHLSHPFSN
TMEMGFEQIPSILIELQFQRQQQLELQHQQQLELQQRRQLELQQHRQLELQQRRQLELQQ
RRQVELQQQQRQFELQQQHHLLHQQQQQLRQYQMKLQQQQVLEQLLQHQMPDLGYGQGKG
DPLRENLLEQIQFRTRLAAELQQNSHNPRHLDLTLEQIIRAKIGQNNLQEPQTDILDLLS
QVKHGNILPSDLQFHLQQEQMQAQELSSARQQLGIDGESQVGWPWSIDEAGQTFRNTTGH
HQSKSTEFSASDFYLQQQRVSSHDEHLSHNKWNHALQEPHQGGFYEPSSMAFDHPTSLPA
VTPGMRMDNLNGHSQGPDSAEPLYMHSTDQLGSFSSNVSSRHRQVFGDIYGSRAEMTESH
LPGKQGQQENSWVEGGMQQLHLEAERKRNVSEVAGNSSFWTSARGDEESSKQVLMNLQQN
MGLQSIRSSEDDYRHLISSSKSQESYWPITESFSLNDIPDQEATMSDSFIEKPQNSKSNS
LLQDNHAMSLSGQLHHQGNGERLSLRSKSGALTEEPAFFSGIVDTSHTNHADNMFVDKSA
MDKEVAELDIRYGSKGMSAMARSVSHIEESFVEQAETAMDFANASSRQSSRHSSLSSAGG
NGGLHGYEMGLDKLTGEEVSIDRMPSILTRGLDSALHKRPPVSRAYSSKDVSSDMTSASH
IKQKNRASLATSDERRSELVENVAATRGGDSQTSGKKEARFRRSSSYNDAGITETSFMDV
LKKPVFTEAEAANAAALESSDGPLSGRSGKKKGKKGRQIDPALLGFKVSSNRIMMGEIQH
PYE
NT seq
5052 nt
NT seq
+upstream
nt +downstream
nt
atgactgacggaaagccgaatctccctgacgatctcctcctcctctcttgcaagtcaacc
gatgaacgcctctcctccttcaaagatcgtggaggaattggtgaggacaagtctctgttg
agtttgcctgatgactcaaaagatcaagtgactgcagacaacactatacctctttctcca
caatggctttatgctaaaccggtggatgctaagtcatcaactactggggcatcaggggaa
acacgtgcttcaaattctttgtcccatggaaactccagtgatagcaatttgaaagacaat
tggcgtttagatggatcccaagacaagaaagatcggaggaggattgctcctgatgttgaa
agcagccgccgttggcgtgaggaggagagggatacaggtttgcttggtagaaaagatcgc
agaaaagaagaccatcgtgctgattctgtttcagctagagatatatctgagactagaact
ttgccttcttcagatcgttggcatgacggcaacaaccgcaattctgctcatgaatcccga
agagacagcaagtggtcatctaggtggggtcctgaagagaaagagaaggattctcgaaat
gataagagggcagatgttgagaaggatgaggctcacagcgacaaacaaaattttggcact
gctagccgcccaacttccgagcgtgagaacgattctcgtgataagtggaggccatcttct
gagcgtgaaaatgattctcgtgataagtggaggcctcgccatcgtatggaagttcattct
ggtggacctgctgcttacaggagtgcacctggatttgggtcagaaagaggacgtgtggag
agcccaaatgtgccgtttgctgccggaagaggaaggtccaacaatagtgggaacttacaa
attggcaggcatcttactgcttccatcgggtccattcccgtggataagaatcatgcattc
tgctatccgaggggaaaacttcttgacatttaccgtaagcacaagactcttccaagtttt
gataccataccagatgggatggagcttgtgtctccactaacacaggaaattgctatcaag
ccattggcttttgttgcacctgatgcagagcaagaggctgtccttggagatatatggctg
ggaaaaattacaagcagtggaggattgaacaactcatttagagaaaagaacgagtcatca
aataataacactgcaggcattggtgaggagaatgtgagtttctctgttaagactgaagaa
attgcagactcttttggaaaaattactggcaatgcttccggtcaaggtatgggcgctgag
atgttcaatgcatcaatggctgaggaaaaggatatgcacaaagatgataaacagaagtgt
gtgacaacaagtggcagagcgttgattgatggctttgtgcctgcagttttcaagagagac
gaatccagcagtgttggggagagtggcctgattgacaacgttgtggatttaaaagctttt
gaaaggcagccagtggcagatgtggcttttcagaataaccttaagttggaggatattgag
tcagccacttcttttgaaattggtagccagctccctgatgattcaagttcactatttgat
ttttcttctgcacagcaaaattcaagaagccatcaattttcgtttaatataaataatgat
gggcatcaattcacgggtactatcatgcctgaggaactatcattgtgctatcttgatcct
caaggggtaattcagggaccgtaccttggtattgatattattgcatggcttgagcaagga
tattttggaactgacctaccagttcgtttgtcagatgctcccgatggatcacccttccat
gaacttggtgatattatgcctcacctaaaacttaaacccgggtgtgcttcaagtactagt
ccgtctgctaaggtacaactatctgatgatgttggagaaagtttggaagggagcacagcg
acttctgcttctcttgaatataaggtttctgctgtcagggaagaccagcagcgggtttca
tctggatttgaggccatctttagtgctagtggtcagtcaagggttcctgatcatggtttt
ctcagtgggttggagtattctgatgatcaaagatttcaaaatgttgttactccggatgaa
gaaattgtctttcctggaaggcctggaagtagtggcaaccctttgatgagagatgttgca
gacgttcagcgatttgttcctaatccttctaccaaccctgccatcttaaatgaattttca
gaagctggcatgcatactcatcaggatgaaatagttcatccgtttggcttgtcaatgtcc
gagctcagtagcaactctaatcttaggcgtgctcaatcaaccaacatggcttctggaatg
ggtgatgaatttccagcgcaggttcatgctatggactcttatacagagcatgatgctgcc
cttgccagtcacaggtcctttgatgcagtatttgatcaatcccattatgcagagacatgg
cctgaagattataggaaaaagctactcactaatccccacattgatctaagttccgcagat
gctcgacacttatttcacaggcagccagagttcaatgattttgatcagcagcatctcatg
ttgcagaagatgcaaaaagaaagtcaacaacagaatcatttatctcatcccttctcaaat
actatggaaatgggttttgagcaaatcccttctattcttattgaactgcaatttcaacgt
cagcagcagctggagcttcaacatcaacagcagctggagcttcaacagcgtcggcagctg
gagcttcaacagcatcggcagctggagcttcaacagcgtcggcagctggagcttcaacag
cggcgacaggtggagcttcaacaacagcagcgacagtttgagcttcagcaacagcatcat
ttactgcaccaacagcaacaacagcttcgtcagtaccaaatgaaactgcagcagcagcag
gttctggaacagttgctgcagcatcagatgcctgatcttggatatgggcagggaaaggga
gatccattgagagaaaacttgcttgagcagattcaatttaggacacgactggcggccgaa
ctgcagcagaattcacataatccaaggcacctcgatctaacactggagcagataattcga
gctaagattggccagaataatcttcaagaaccccagactgatatcttggacctcttatca
caggtgaagcatggtaatatactcccttcagacctgcagttccatcttcagcaagaacag
atgcaggcgcaagagttatcttcggcaaggcagcagttaggaatcgatggtgaaagccaa
gttggttggccatggtccatcgatgaagctggtcagaccttcagaaatactactggtcat
caccagtctaagtctactgaatttagcgcttcagatttttacctgcaacagcagagggtt
tcctcacatgatgaacatttaagccataacaaatggaatcatgctttacaggagccacat
cagggtgggttttatgagcctagctctatggcatttgaccatccaacttctctgcctgct
gtcactcctgggatgaggatggataatttaaatggtcattcccaaggtccagattcagca
gagcctctatatatgcattctactgatcaactgggttccttctcgtccaatgtctcttct
cgtcatcgacaagtttttggtgatatttatggttctcgcgctgaaatgacagagagccac
ctccctggaaaacaagggcagcaagagaatagttgggttgaaggagggatgcaacaattg
catcttgaagctgaaagaaaaaggaatgtttcagaagttgctggaaactctagtttttgg
acctcagctcgcggagatgaggagagctcaaagcaagttttaatgaatcttcaacaaaat
atgggtcttcagtctattcggtcatcggaagatgattatcggcaccttatatcttcttct
aaatctcaggaatcctattggccaatcactgagtcattctctttaaatgatattccagat
caagaagccaccatgagtgactcatttattgaaaagcctcaaaattcgaaatcaaattct
ctgctgcaggataaccatgctatgtccttgagtggtcaattacaccatcaaggaaatggt
gaaagattgtccctaaggtcaaaatctggagcactaactgaagaaccagcattcttttca
ggcatagtagatacttctcatactaatcatgcggataacatgtttgttgataaatctgcc
atggataaagaagtggcagaattggatatcagatatgggtccaaaggcatgagtgccatg
gccaggtctgtttcgcacattgaagagagctttgttgaacaagctgaaactgctatggat
tttgctaatgccagtagcaggcagagtagcaggcatagttccctgagcagtgctggtggt
aatggaggcctacacgggtatgagatgggattagataaattgactggtgaagaggtctct
attgacaggatgccttctattttaactagagggcttgacagtgccttgcataaacgccca
ccggtatcacgggcctattcttccaaggatgtgtcgtcagacatgacatctgcttcgcat
atcaagcaaaaaaatcgggcaagccttgcaacttctgatgaaaggaggagtgagcttgta
gagaatgtagcagcaacccggggtggtgatagtcagacatctggcaagaaagaagcgcgt
tttaggaggtcctcatcttacaatgatgctggtataacagagacatcatttatggatgtg
ctaaaaaagccagtgtttactgaggctgaagccgccaatgcggctgccttggaatcatct
gatggtccactgagtgggcgaagcgggaaaaagaaagggaagaaaggaaggcaaattgat
cctgctctccttggtttcaaggtttctagcaatcgcattatgatgggtgagatacaacat
ccttacgagtaa
DBGET
integrated database retrieval system
