Populus alba (white poplar): 118055287
Help
Entry
118055287 CDS
T07314
Name
(RefSeq) LOW QUALITY PROTEIN: uncharacterized protein
KO
K18730
PERQ amino acid-rich with GYF domain-containing protein
Organism
palz
Populus alba (white poplar)
Brite
KEGG Orthology (KO) [BR:
palz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
palz03019
]
118055287
Messenger RNA biogenesis [BR:
palz03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
118055287
Surveillance factors
Other surveillance factors
118055287
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GYF
Motif
Other DBs
NCBI-GeneID:
118055287
NCBI-ProteinID:
XP_034923031
LinkDB
All DBs
Position
1:36395904..36403812
Genome browser
AA seq
1665 aa
AA seq
DB search
MTDGKLNLPDDLLLLLSPRSTDERLSSFKDRGGIGEDKALLSLPDDSKDQVAADNTIPLS
PQWLYAKPVDAKSLTTGASGETRASNSLSHGNSIDNNLKDNWRLDGSQDKKDRRKIAPDV
ESSRRWREEERDTDRWHDGNSRNSAHESRRDSKWSSRWGPEDKEKDSRTDKRADVEKDDA
HSDKQNFVTASHPNSEPTSERENDSRDKWRPTSERENDSRDKWRPRHRKDIHSSGPAAYR
SAPGFGLDRGRQESPNVPFAAGRGRSSNSGNLQIGRYLTASSIGSIPLDKNHVFCYPRGK
LLDIYRKHKTLPSFETIPEGIELVSSLTQEISIKPLAFVAPDAEEEAVLRDMWQGKITSS
GALNNSFREKNDSSSNSTAGFGEGTLGEGNESFSVKTAEIAHSFGKITGNASGQGAVAET
LDTSMAEEKDTHKDDKQKHTTTIAGALMDGFVPADFKKDDPSSFGESGLSDNIMELKAFE
RQPVEDLAFQNKLKLEDIEPATSFEMDNQLPDDSSSLFDFSSAQKNPSSHQFSLNSNSEV
HQFGGAITPEELSLCYLDPQGAIQGPYLGIDIIAWFEQGYFGTDLPVRLSDAPNGSPFHE
LGDIMPHLKLKPGCASSTSPSAKLQLSDAVGESLEGSTVTPASLELKASAVREDQQRASS
GFEAISNVSGQSRVPDHGFLGGMEYSDDRRFQNVVTPDEEIVFPGRPGNSGNPLMGDVAD
FQRFAPNPSTNPAILNELSETGMHTHQDEIVHPFGLSMSELRSNSNLRRAQSSNMASSMG
DEFPAQVHAMDPYTEHDAALASHRTFDAGFDQSHYAETWPEDYRKKPLTNPHIDLGSADA
RHFFHRQPEFNDFDQQHLMLQKMQKECQQQNHLSHPFSHTMELGFEQIPSNLIELQFQHQ
QQLELQQRQQQQQQQQQQQQLELQQRRQIELQQRRQLEHQQQQRQFEHQQQQRQFELQQQ
HHLLHQQQQQLRQYQMKLQQQQVLEQLLQHQMPDLGYGQGKGDPLRENLLEQIQFRTRLA
AELQQNSHNPRHLDLTLEQIIRAKIGQNNLQEPQTDILDHLSQAKHGNILPSDLQFHLQQ
EQMQAQKLSLARQQLGMDGESQVGWPWSIDEAGQTFRNTTGHHQSKSTGFNASDFYLQQQ
RLSSHDEHLSHNKWNHALQEPHQGGFYEPSSMAFDHPTSLPAVTPGMKLDNVNGHSQGPD
SAEHLYMHSTDQLGSFLSNVSSHHRQVYGDIYGSRAEMMESHLPGKQGQQENSWVKGRMQ
QLHLEAERKRNVSEVAGNSSFWTSAGGDEESSKQVLMDLHQKMGLQSIRSSEDDYRHLIS
SSKSRESFWPITESFSLNDIPDQEATMNDSFIEKPQNSKSNSLLQDNHAMSLSGQLHHQG
NGERLSLRSKSGALTEEPTFFSGIVDTSHTNHADNMFVDKSAMDKEVAELDTRYGSKGMS
AMARSVSRNEESFVEQAETAMDFANASSRQSSRHSSLSSAGGNGGLHGYEMRLDKSTGEE
VSIDRMPAFLTRGVDNALHKRPPVSQALSSKDVLSDMASASHIKQKNRASLATSDERRNE
PVENVAATLGGDSQISGKKEARFRRTSSYNDAGITETSFMDVLKKPVFTEAEAANAAALE
SSDGSLGGRSGKKKGKKGRQIDPALLGFKVSSNRIMMGEILHRDE
NT seq
4998 nt
NT seq
+upstream
nt +downstream
nt
atgaccgacggaaagctgaatctccccgacgatctcctcctcctcctctctcccaggtca
accgatgaacgcctctcctccttcaaagatcgaggaggaattggtgaggacaaggctctg
ttgagtttgcctgatgactcaaaagatcaagtggctgcagacaacactatacctctttct
ccacaatggctttatgctaaaccggtggatgctaagtcattgactactggggcatcaggg
gaaacacgtgcttcaaattctttgtcccatgggaactccattgataacaatttgaaagac
aattggcgtttagatggatcccaagacaagaaagatcggaggaaaattgctcctgatgtt
gaaagcagccgccgttggcgtgaggaggagagggatacagatcgttggcatgatggcaat
agccgcaattctgcgcatgaatctcgaagagacagcaagtggtcatctaggtggggtcct
gaagataaagagaaggattctcgaacagataagagggcagatgttgagaaggatgatgct
cacagtgacaaacaaaattttgttactgctagccacccaaattctgagccaacttctgag
cgtgagaacgattctcgtgataagtggaggccaacttctgagcgcgagaatgattctcgt
gataagtggaggcctcgccatcgtaaggatattcattctagtggacctgctgcatacagg
agtgcacctggatttgggttagatagaggacgtcaggagagcccgaatgtgccgtttgct
gccggaagaggaaggtccagcaatagtgggaacttacaaattggcagatatcttactgct
tcttctattgggtctattcctctggataagaatcatgtattctgctatccaaggggaaaa
cttcttgacatttaccgtaagcacaagactcttccaagttttgagaccataccagaaggg
atcgagcttgtgtcttcactaacacaggaaatttctattaagccattggcttttgttgca
cctgatgcagaggaagaggctgtcctcagagatatgtggcagggaaaaattacaagcagt
ggagcactgaacaactcatttagagaaaagaacgattcatcaagtaattccaccgcaggc
tttggtgaggggactttaggtgaggggaatgagagtttctctgttaagactgcagaaatt
gcacactcttttggaaaaattactggtaatgcttctggtcaaggtgctgtcgctgagaca
ttagatacatcaatggctgaggaaaaggatacacataaagatgataaacagaagcataca
acaacaattgccggagcattgatggatggctttgtgcctgcagatttcaagaaagatgat
cccagcagttttggggagagtggtctgagtgacaacattatggagttaaaagcttttgaa
aggcagccagtggaagatttggcttttcagaataaacttaagttggaggatattgagcca
gctacttcttttgagatggataaccagcttcctgatgattcaagttctctatttgatttt
tcttctgcacagaaaaatccaagcagccatcagttttccttgaatagcaatagtgaggta
catcaattcgggggtgctatcacacctgaggaactatcattgtgctatcttgatcctcaa
ggggcaattcagggaccataccttggtattgatattattgcatggtttgagcaaggatat
tttggaactgacctaccagttcgtttgtcagatgctcccaatggatcacccttccatgag
cttggtgatattatgcctcacctaaaacttaaacctgggtgcgcttcaagtactagtcca
tctgctaagttacagctatctgatgctgttggagaaagcttggaagggagcacagtgact
cctgcttcccttgaacttaaggcttctgctgtcagggaagaccaacagagggcttcatct
ggatttgaggccatctccaatgttagtggtcagtcaagagttcctgatcatggttttctc
ggtgggatggagtattctgatgatcgaagatttcaaaatgttgttactccggatgaagaa
attgtctttcctggaaggcctggaaatagtggcaaccctttgatgggagatgttgcagac
tttcagcgatttgctcctaatccttctaccaaccctgccatcttaaatgaattgtcagaa
actggcatgcatactcatcaggatgaaatagttcatccatttggcttgtcgatgtctgag
cttagaagcaactctaatctgaggcgtgctcaatcatccaacatggcttcaagcatgggt
gatgaatttcctgcacaggttcatgctatggacccttatacagagcatgatgctgctctt
gccagtcacaggacctttgatgcaggttttgatcaatcccattatgcagagacatggcct
gaagattataggaaaaagccactcactaatccccacattgatctaggttccgcagacgct
cgacacttttttcacaggcagccagagttcaatgattttgaccagcagcatctcatgttg
cagaagatgcaaaaagaatgtcaacaacagaatcatttatctcatcccttctcacatact
atggagcttggttttgagcaaatcccttctaatcttattgaactgcaatttcaacatcag
cagcagctggagcttcaacagcgccagcagcagcagcagcagcagcagcagcagcagcag
ctggagcttcaacagcggcggcagattgagcttcaacagcggcggcagttggagcatcag
caacagcagcgacagtttgagcatcagcaacagcagcgacagtttgagcttcagcaacag
catcatttactgcaccaacagcaacaacagcttcgtcagtaccaaatgaaactgcagcag
cagcaggttctggaacagttgctgcagcatcagatgcctgatcttggatatggtcaggga
aagggagatccattgagagaaaacttgcttgagcagattcaatttaggacacgactggcg
gccgaactgcagcagaattcacataatccaaggcaccttgatctaacactggagcagata
attcgagctaagattggccagaataatcttcaagaaccccagactgatatcttggaccac
ttatcacaggcgaagcatggtaatatactcccgtcagacctgcagttccatcttcagcaa
gaacagatgcaggcgcaaaagttatctttggcaaggcagcagttaggaatggatggtgaa
agccaagttggttggccatggtccattgatgaagctggtcagaccttcagaaatactact
ggtcatcaccagtctaagtctacaggatttaacgcttcagatttttacctgcaacagcag
aggctttcctcacatgatgaacatttaagccataacaaatggaatcatgctttacaggag
ccacatcagggtgggttttatgagcctagctcaatggcatttgaccatccaacatctctc
cctgctgtcactcctgggatgaagttggataatgtaaatggtcattcccaaggtccagat
tcagcagagcatctatatatgcattctactgatcaactgggttccttcttgtccaatgtc
tcttctcatcatcgacaagtttatggtgatatttatggttctcgtgctgaaatgatggag
agccacctccctggaaaacaagggcagcaagagaatagttgggttaaaggaaggatgcag
cagttgcatcttgaagctgaaagaaaaaggaatgtttcagaagttgctggaaactctagt
ttttggacctcagctggaggagatgaggagagctcaaagcaagttttaatggatcttcac
caaaaaatgggtcttcagtctattcggtcatcggaagacgattatcggcaccttatatct
tcctctaaatctcgggaatccttttggccaatcactgagtcattctctttaaatgatatt
ccagatcaagaagccaccatgaatgactcatttattgaaaagcctcaaaattcaaaatca
aattctctgctgcaggataaccatgctatgtccttgagtggtcaattacaccatcaagga
aatggtgaaagattgtccctaaggtcaaaatctggagcactaactgaagaaccaacattc
ttttcaggcatagtagatacttctcatactaatcatgcggataacatgtttgttgataaa
tctgccatggataaagaagtggcagaattggataccagatatgggtccaaaggcatgagt
gccatggccaggtctgtttcgcgcaatgaagagagctttgttgaacaagctgaaactgct
atggattttgctaatgccagtagcaggcagagtagcaggcatagttccctgagcagtgct
ggtggtaatggaggcctacacggttatgagatgagattagataaatcgactggtgaagag
gtctctattgacaggatgcctgcttttttaactagaggcgttgacaatgccttgcataaa
cgcccaccggtgtcacaggccttatcttctaaggatgtcttgtcagacatggcatctgct
tcgcatatcaagcaaaaaaatcgggcaagccttgcaacttctgatgaaaggaggaacgag
cctgtagagaatgtagcagcaaccctgggaggtgatagtcagatatctggcaagaaagaa
gcgcgttttaggaggacgtcatcttacaatgatgctggtataacagagacatcatttatg
gatgtgctaaaaaagccagtttttaccgaggctgaagcagctaatgcggctgccttggaa
tcatctgatggttcactgggtgggcgaagtgggaaaaagaaagggaagaaaggaaggcag
attgatcctgctctccttggcttcaaagtttctagcaatcgcattatgatgggtgagata
ctacatcgcgatgagtaa
DBGET
integrated database retrieval system
