Populus alba (white poplar): 118055328
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Entry
118055328 CDS
T07314
Name
(RefSeq) autophagy-related protein 13b isoform X1
KO
K08331
autophagy-related protein 13
Organism
palz
Populus alba (white poplar)
Pathway
palz04136
Autophagy - other
Brite
KEGG Orthology (KO) [BR:
palz00001
]
09140 Cellular Processes
09141 Transport and catabolism
04136 Autophagy - other
118055328
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
palz04131
]
118055328
03029 Mitochondrial biogenesis [BR:
palz03029
]
118055328
Membrane trafficking [BR:
palz04131
]
Autophagy
Autophagosome formation proteins
ULK complex
118055328
Atg1 complex
118055328
Mitochondrial biogenesis [BR:
palz03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
118055328
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATG13
Motif
Other DBs
NCBI-GeneID:
118055328
NCBI-ProteinID:
XP_034923085
LinkDB
All DBs
Position
1:34717436..34722067
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AA seq
659 aa
AA seq
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MASSHSTPTEAAKMEQIITEFFPKSLQIILESRSPFMSSRNFSGEQIVSSSPSSSLSSSS
SVMPRDKWFNLALRECPAALDLWRQSYLEPMIVDVILVQRPPGRWDPVNYSPKREIVRNF
SSKDQCPFYWNSDQEELGCEGKNEKILERWVVQYEARKSRDTGSGSRRHSNTLQICYKKS
ILLLRSLYATVRLLPAYKIFRDLNLSRKIPSYTLTHRMSSFVEPFTRKEDSEMQRFVFTP
VDTTCGRLCLSVLYHSSLSDVSSESSTPMSSQFIPDYVGSPLAEPLKRFPSLPVSQDSPS
SLPFSRRHSWSYDLNKASPPSFCFSPSPTHLEKHGSISNPSSCRFQPMSLPPHPPEVPSA
HKKNTSFDEYYPSPNYTPSPSPSPPIYIPGSHLSKGLLRSESAPVSIPAVKRASSPLLFN
KQNLPPSPPLKATRSGNPKTDRSTGLVHAGATAEKFFSLGKDDIRKYSSLKTSSNSSPQI
SLSRTSSRSYQDDFDDSEFPCAYFDVEYDDVMDPGRRPESFDKKSHQSDPLEPGGLFPVK
KSQEAAVGALVFMLKKAPPLCQDFSGSVDLPPDSRSKTWSSNLQECNPISGAPVGPQAAA
SGVASSGPVASKTTADAFEELQGYREMKKDLLHSQAGRSNTSANCAPMSKPTSSSAPGY
NT seq
1980 nt
NT seq
+upstream
nt +downstream
nt
atggcatcatcacatagtacacccactgaggctgcaaaaatggaacaaattatcactgag
ttttttcctaaaagtcttcaaattatacttgagtctaggtctcctttcatgtcatcacgt
aattttagtggtgaacaaatagtatcctcgtctccgtcctcgtctttatcatcctcctcg
agtgtgatgccaagagataaatggttcaatttagcccttagggaatgccctgctgcgctt
gatctttggcgccaaagctatttagaaccgatgattgttgatgtgattttggtgcagagg
ccaccaggtcggtgggatcctgtgaattattcccccaaaagggagattgttaggaatttt
tcgtcgaaggatcagtgtccattttactggaattctgatcaggaagaattggggtgtgag
gggaagaatgaaaagattttagagaggtgggtggtgcagtatgaggctcggaagtcaagg
gatactggttctgggagtaggagacatagcaataccttgcaaatatgttataagaaatcg
atactacttctgaggtccttgtatgcaactgttagacttttacctgcttataagattttc
cgtgacctcaatttgtctcggaaaattccttcatatacacttacacataggatgtcttcc
tttgttgagcccttcacacgcaaagaagattctgaaatgcagcgatttgtgttcacccct
gtggatactacctgtggtaggctttgcctttcagtgctgtatcactcatcattatcagat
gtcagctctgagtcatcaactcctatgtcctcccaatttatccctgattatgttggtagc
cccttggcagaaccactgaagagattcccctctcttcctgtgtcacaagattctccatca
tctttgcccttctcaagacggcatagttggagttatgaccttaataaagcctcgccacct
tcattttgtttctcaccatcacctactcatttagaaaaacatggatcaatttctaatcca
agttcctgccgattccaacctatgagcttgcctcctcatccacctgaagtgccttcagct
cataagaagaatacgagctttgatgaatattatccttctccaaactatacaccgtctcca
tccccatcaccaccaatctatattcctgggagtcatctttccaagggtcttttacgatct
gaaagtgcacctgttagcatacctgctgtcaagcgtgctagttctcccctgttgttcaac
aagcaaaacttgcccccatcaccaccactcaaagctaccagatctggtaatccgaagact
gatagaagtacaggtttggttcatgctggtgcaacagctgagaagtttttctctctcggg
aaagatgacattagaaaatattccagcttgaaaacatcatccaacagctctccacagatt
tcattgtccagaacttcaagtaggtcatatcaggatgattttgatgattctgagtttcct
tgcgcttactttgatgtggagtatgatgatgtgatggatccaggtcgaaggcccgagtcc
tttgataaaaaaagccatcaatctgacccacttgagcctggaggtctctttccagttaaa
aaatcccaagaagcagctgttggtgctcttgtattcatgctgaagaaagccccaccttta
tgccaagatttctctggttcagttgatttgccaccagactccaggtccaaaacatggagc
agcaacctccaagaatgcaatccaatctctggtgcaccagtaggtccgcaggctgctgct
tcaggtgttgcgtcttctggacctgttgcatcaaagacaacagctgatgcatttgaagaa
ctccagggctacagagagatgaagaaagacttgttgcatagccaagctggcaggtccaac
acttcagctaattgtgctccaatgtcaaaacctacaagcagcagtgcacctggatattga
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