Populus alba (white poplar): 118055329
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Entry
118055329 CDS
T07314
Name
(RefSeq) RING-H2 finger protein ATL78
KO
K19040
E3 ubiquitin-protein ligase ATL10/75/76/77/78 [EC:
2.3.2.27
]
Organism
palz
Populus alba (white poplar)
Brite
KEGG Orthology (KO) [BR:
palz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
palz04121
]
118055329
Enzymes [BR:
palz01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
118055329
Ubiquitin system [BR:
palz04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
ATL proteins
118055329
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-RING_11
zf-C3HC4_2
zf-rbx1
zf-C3HC4
zf-RING_5
FANCL_C
zf-ANAPC11
zf-RING_UBOX
Prok-RING_1
Pus10_C
zf_RING_Vps8_fungal
zf-RING-like
Motif
Other DBs
NCBI-GeneID:
118055329
NCBI-ProteinID:
XP_034923088
LinkDB
All DBs
Position
1:complement(34698154..34699414)
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AA seq
221 aa
AA seq
DB search
MSTTFSTSPPLLSQQFLGDFHPRKLLLHDPLSQPSSIASPSPSGNIQDPLNPNANGDKHF
DINVVMVLIVLICALLVSLGLNYFIRCAVRCSYLNGNSSNRGIKKKALRTFPIENYSPEK
SKMPGLDTQCVICISEFVHGDRVRILPKCSHGFHVKCIDEWLRSHSSCPTCRHCLMETCQ
KIAGVSQASSSEQPPSVAQERVVNIAPLEREGLVSNYREAS
NT seq
666 nt
NT seq
+upstream
nt +downstream
nt
atgtctaccactttttctacatcccctcctctactctcccaacaatttcttggggatttt
cacccaagaaaactgttactacacgaccctctttcccaaccatcttccattgcgtctcct
tcgccttctggtaacatccaagatccattgaatcctaatgccaatggcgacaagcacttc
gatataaatgttgttatggtccttatagtcctaatatgtgcgctccttgtttcacttgga
ctaaattatttcataaggtgtgcagtgaggtgctcatatttaaatggaaattcttccaat
agagggatcaagaaaaaagccttgagaacttttcctatagagaattactccccagagaag
agtaaaatgccagggctggacacacaatgtgtcatatgcatatcagagtttgtacacggt
gatcgagttcgaattttgcccaagtgtagccatggatttcacgtgaagtgcattgatgag
tggcttcgctcacactcatcttgccctacatgcaggcactgccttatggagacgtgccaa
aagattgctggtgttagtcaggctagctcatcggaacaaccaccttctgtggcgcaagaa
agagttgtgaacattgcacccctagagcgtgaaggtttggtctccaattacagggaagcc
agctaa
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