Populus alba (white poplar): 118055395
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Entry
118055395 CDS
T07314
Name
(RefSeq) paired amphipathic helix protein Sin3-like 2
KO
K11644
paired amphipathic helix protein Sin3a
Organism
palz
Populus alba (white poplar)
Brite
KEGG Orthology (KO) [BR:
palz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
palz03036
]
118055395
Chromosome and associated proteins [BR:
palz03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
Sin3A-HDAC complex
118055395
REST complex
118055395
Heterochromatin formation proteins
Other heterochromatin formation proteins
118055395
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAH
Sin3_corepress
Motif
Other DBs
NCBI-GeneID:
118055395
NCBI-ProteinID:
XP_034923182
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Position
1:complement(34990405..34993157)
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AA seq
639 aa
AA seq
DB search
MKRQREHSDHYRSLLCQYPREEVEPALNYSKKLKAWFQYDQPEEKIRSLGRILEKFMDTA
AAHDGLVGGLTVVLENFSARVKEILGGNHDLIGGLNSFLRLEFQISLDVEEKKETEPAMK
SKTVGDGERMDFVKKIDGKCGKDVCGALLKNFRLRKEGSMSLADVCDFGHRVTEGHPDLL
LNFLYSTPITEATSLVYYLPGLESSELRNCRKESSESFEVYGRNRESEFVKAGGSQVKGG
SHGNEEEKESETTTESKTFRQGMDFINKLKIKCGEDGLEKFLKIFKLLKKGSRTLVDVFD
SGLKLTEGHGDLQEDFIKFMPLSELEKPLAYHLSDLLSTDLTNTRAADVPQKKRQNDKET
KLIMGDEAEVKASDSEAEKIREGIGFFEKVKKRLPCEMSHKTFLKLFFYYSKGKIGKAEL
VKMVANLIGNYPDLMSDFYNFWRNCESVNVLEVRGCKARDRRRQKQPREELDISSCKRCT
PRRRLPNHHERNVFKCADEQYELDMLVEWFKSAVIHAEEMGGGTVKNKGNNMTGRIFLRC
IERLYGDQGLEILNIFDKDPQRALPVLRLRLQEKLEELIRYRQSLKGLLKDDVRSLYQIS
FKHLFECINVAVDLVLFSSSAFVIQSASFYVAFSSFRAL
NT seq
1920 nt
NT seq
+upstream
nt +downstream
nt
atgaagagacagagagagcacagtgaccactatcgttccctcctctgtcagtatcctcgt
gaagaagttgagcctgccctaaactattccaagaaactgaaagcctggtttcaatatgac
cagcctgaagaaaaaatccgcagccttggcaggatcttggaaaagttcatggatacagcg
gctgcacatgatggtttggtaggggggctgactgtcgtgcttgaaaatttttcagcaaga
gtgaaggaaattcttggaggtaatcatgacttgattggtgggctgaactcctttttgcgg
ctggagtttcaaatcagccttgacgttgaggagaagaaggaaactgagccagccatgaag
agtaagacagttggagacggagagcgtatggatttcgtgaaaaagattgatggcaagtgt
ggtaaggatgtttgtggagcattgttgaagaatttccgtttgcgtaaggaaggatctatg
agtttggctgatgtctgcgattttggtcatagggtaacagaaggccatcctgatttgcta
ctaaactttctttactctacgccaattactgaagcaacatcattggtctattatcttcct
ggtttggaatcttcagaactcagaaactgcaggaaagagagttctgaaagttttgaagtt
tacggaaggaacagggaatcagaatttgtgaaggcaggtggatctcaagtgaaaggcggt
agccacggtaacgaggaggagaaggaatctgagacaaccacagagagtaagacattccga
cagggtatggattttataaacaagctgaagatcaagtgtggtgaggatggtttggaaaaa
ttcttgaagattttcaaattgcttaagaaagggtccaggactttggttgatgttttcgat
tctggtcttaagctaaccgaaggccatggtgacttgcaagaggacttcattaaatttatg
ccactttctgaattagaaaaaccactggcttatcatctttcagatttgctatctacagac
ctcaccaacactagggctgctgatgtgccgcagaaaaagaggcagaatgataaggaaaca
aaacttatcatgggagatgaagctgaagtgaaagccagtgacagcgaggcggaaaagatt
agagaaggaattggattcttcgagaaagttaagaagaggctaccttgtgaaatgagtcac
aagacattcttgaagcttttcttttattacagcaagggaaaaattggaaaggcagaattg
gtaaaaatggttgccaatttgataggaaactatcctgatttgatgagtgatttttataat
ttctggaggaattgtgagagtgttaatgtgcttgaagtaaggggatgtaaggcaagggac
aggaggaggcagaagcaaccaagggaagaacttgatatctctagctgtaaaaggtgcact
cctaggcgtaggcttccaaatcatcatgaaaggaacgtgttcaaatgcgcagatgaacaa
tatgagctggacatgttagtggaatggttcaaatcagctgttatacatgctgaggaaatg
ggaggaggcacagtaaaaaataaagggaacaatatgactggaagaatctttctgaggtgt
atcgaacgtttatatggtgatcaaggtctggagattctgaacatattcgataaagatcct
caacgtgcactgcctgtcttgagattgcgcttgcaggagaaactagaggagctgattcga
tatcgtcagagtttaaagggtctgctcaaagatgatgttcgaagtctgtatcagatcagc
tttaagcatttatttgagtgcataaatgttgcagtggacttggttctttttagctctagt
gcttttgtaatccaaagtgcttctttctatgtagctttctccagcttcagggcattgtga
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