Populus alba (white poplar): 118055569
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Entry
118055569 CDS
T07314
Name
(RefSeq) probable pectate lyase P59
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
palz
Populus alba (white poplar)
Pathway
palz00040
Pentose and glucuronate interconversions
palz01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
palz00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
118055569
Enzymes [BR:
palz01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
118055569
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Motif
Pfam:
Pec_lyase_N
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-GeneID:
118055569
NCBI-ProteinID:
XP_034923426
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Position
8:10397816..10399673
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AA seq
441 aa
AA seq
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MQTLNGHFLFFSLFVSLAAFVPTLQGHIGEFDEYWKKKADEAREAAEEAFYPDPMNVTNQ
FNFQVNKVMTETNSTRRNLGSKRGERCMATNPIDRCWRCDPNWASHRQRLADCVLGFGHK
TVGGKYGKIYVVTDSSDNDMLNPKPGTLRHAVIQKEPLWIIFSGSMVIRLNQELMVASNK
TIDSRGAKVHIAYGAGITLQFVQNVIIHGLRIHDIVSGNGGLIRDAVDHYGFRTKSDGDG
ISIFGSSNIWIDHVSMSNCQDGLIDVIMGSNAITISNNHFTRHNEVMLFGASDSYSGDSI
MQITVSFNHFGRGLVQRMPRCRWGFFHVVNNDYTHWMMYAIGGSHNPTIVSQGNRFIAPN
DTFAKEVTKRDYAVESEWKNWNWRSDNDLMMNGAFFVQSGSPITSSRRISRFHVMKSKPG
TFVTRLTRFSGSLGCFKGKPC
NT seq
1326 nt
NT seq
+upstream
nt +downstream
nt
atgcaaactctcaatggccatttccttttcttctccctttttgtgtcacttgcggcattc
gttccaactctgcaaggccacattggtgaattcgatgaatactggaagaagaaagccgat
gaagcccgtgaagccgccgaggaggctttctacccggatcccatgaacgtcaccaaccag
tttaacttccaggttaacaaggtcatgacggagaccaacagcactagaaggaacctagga
agcaaaagaggcgaaagatgcatggccacaaacccaattgatcgatgctggcggtgtgac
ccgaattgggccagtcatcgacagaggttagctgattgcgtccttggctttggccacaaa
actgtcgggggaaagtatggaaagatttacgttgtgacagattcctcagacaatgacatg
cttaaccccaaacctggaaccctacgccatgctgtgattcaaaaagaacccctttggata
atcttttcaggcagtatggtaatcagactcaaccaggagctgatggtagctagtaacaaa
accattgattccaggggagccaaagtgcatattgcttatggtgctggtattactctccaa
tttgtacaaaatgtgatcattcatggccttcgcattcatgacatcgttagcggaaatggt
ggactcatcagggatgctgtagaccactatggattcagaactaaaagcgacggagatggg
atttctatctttggatcctctaacatttggatcgatcacgtttccatgtccaactgccaa
gacgggcttatcgatgtcatcatgggatcaaatgccatcaccatttccaacaaccatttc
actcgccacaatgaggtgatgttgttcggtgcaagtgatagctactcgggtgattctata
atgcaaattacagtttcattcaatcactttggtaggggattggttcagaggatgcctagg
tgcagatggggtttcttccacgtggtcaacaatgactacacccactggatgatgtacgcc
attggtggaagccacaaccctaccatcgtcagtcagggcaatcgatttattgctcctaat
gacacttttgctaaggaggtgaccaagagggattacgcagtagagagcgagtggaagaac
tggaattggagatctgacaacgatctcatgatgaacggagcattctttgttcaatccggg
agtcctatcacttcaagcaggcggatctcaaggtttcacgtgatgaaatcgaaaccagga
acatttgtgaccaggctcactcgattttctggttcacttggctgctttaaaggaaagcct
tgctag
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