Populus alba (white poplar): 118055719
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Entry
118055719 CDS
T07314
Name
(RefSeq) RNA-binding protein 208 isoform X1
KO
K13201
nucleolysin TIA-1/TIAR
Organism
palz
Populus alba (white poplar)
Brite
KEGG Orthology (KO) [BR:
palz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
palz03019
]
118055719
03041 Spliceosome [BR:
palz03041
]
118055719
Messenger RNA biogenesis [BR:
palz03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
118055719
Spliceosome [BR:
palz03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
118055719
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_occluded
RRM_8
RRM_5
RRM_Nup35
Mito_fiss_reg
Motif
Other DBs
NCBI-GeneID:
118055719
NCBI-ProteinID:
XP_034923576
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All DBs
Position
6:complement(25258935..25264024)
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AA seq
419 aa
AA seq
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MYHQHHHPALVAAAMSQMEPIPGGNLPPGFDSSSCRSVYVGNIHVNVTDKLLAEVFATAG
PLAGCKLIRKDKSSYGFVDYHDRSSAALAIMTLHGRQLYGEALKVNWAYASGQREDTSGH
FHIFVGDLSPEVTDATLYACFSVFPSCSDARVMWDHKTGRSKGYGFVSFRNQQEAQSAIN
DLTGKWLGNRQIRCNWATKGVGSNEDKQNSDNQNAVVLTNGSSAGSQENTNEEAPENNPA
YTTVYVGNLSHVVTQAVLHSNFHALGAGVIEEVRVQRDKGFGFVRYNTHEEAAFAIQMGN
GKIVCGKPMKCSWGSKPTPPGTASNPLPPPPPPPAQPYQIAPSTGINQGYSAADLLAYQR
ELALSQAAASGLSGQALLQLTGQHGLSAASMGLSSSGSQALYDGYPNSLAAAQQLMYYR
NT seq
1260 nt
NT seq
+upstream
nt +downstream
nt
atgtatcatcagcatcaccatcccgccctcgtcgccgctgctatgtctcagatggagccc
atccctggtgggaatctgcctcctggttttgattcttcttcttgtcgcagcgtttatgtt
ggaaatattcatgtcaacgtcactgacaaacttcttgctgaagttttcgccactgccggc
cctcttgctggatgcaaactcatcaggaaggataagtcatcatacggttttgtggactac
catgaccgatcatctgcagcacttgcaataatgacattgcatggacgccaactttacggt
gaggcgcttaaagtgaattgggcatatgccagcggccaaagagaggacacatcagggcat
ttccacatatttgttggtgatttgagtccagaggttactgatgcaactttatatgcgtgc
ttctcagtctttcctagttgctctgacgcaagggtcatgtgggatcacaaaactggacgc
tcaaaaggatatggctttgtttcattccgtaatcagcaggaggcacaaagtgcgattaat
gacttaactggtaaatggcttggaaacaggcagataagatgcaattgggcaactaaaggt
gttggttccaatgaagataagcaaaacagtgataaccaaaatgcagttgtacttactaat
ggatcttcagcaggaagtcaggaaaacactaatgaggaggctcctgaaaacaatcctgcc
tataccactgtctatgtcggcaatctttctcatgtggttactcaagctgtgttgcatagt
aattttcatgcccttggggctggagtaattgaggaggtgcgtgtccagagagataaaggt
tttggatttgttagatacaacactcatgaagaagcagccttcgccattcaaatgggcaat
ggaaagatagtttgtggaaagcctatgaagtgctcatggggcagcaagccaacccctcct
ggaacagcttcaaatccattgccacctccacctccacctccagctcaaccatatcagatc
gctccatcaactggtataaaccaaggctactctgcagctgatttgttggcctaccagcgc
gaactcgccttaagccaggcagctgcatctggcctttcaggccaagctcttttacagctg
accggacagcatggcctatctgcagcttcaatgggcttgagctccagcgggtcccaagct
ctgtatgatggatatcctaacagtttggcagcagctcagcagctcatgtattaccgttaa
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