Populus alba (white poplar): 118055834
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Entry
118055834 CDS
T07314
Name
(RefSeq) clathrin heavy chain 1 isoform X1
KO
K04646
clathrin heavy chain
Organism
palz
Populus alba (white poplar)
Pathway
palz04142
Lysosome
palz04144
Endocytosis
palz05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
palz00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
118055834
04142 Lysosome
118055834
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
118055834
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
palz04131
]
118055834
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
palz04147
]
118055834
Membrane trafficking [BR:
palz04131
]
Endocytosis
Clathrin-mediated endocytosis
Clathrin
118055834
Exosome [BR:
palz04147
]
Exosomal proteins
Proteins found in most exosomes
118055834
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Clathrin
Clathrin_propel
Clathrin_H_link
Clathrin-link
TPR_COPA_B
Totivirus_coat
Motif
Other DBs
NCBI-GeneID:
118055834
NCBI-ProteinID:
XP_034923729
LinkDB
All DBs
Position
8:4488285..4499687
Genome browser
AA seq
1705 aa
AA seq
DB search
MAAANAPITMKEVLILPSIGISPQFITFTNVTMESEKYICVRETAPQNSVVIIDMHMPMQ
PLRRPITADSALMNPNSRILALKAQLPGTTQDHLQIFNIEMKAKMKSYQMPEQIVFWKWI
TPKMLGLVTQTSVYHWSIEGDSEPVKMFERTANLQSNQIINYKCDPSEKWLVLIGIAPGS
PERQQLVKGNMQLFSVDQQRSQALEAHAASFAQFKVPGNENPSTLISFATKSFNAGQVTS
KLHVIELGAQPGKPSFTKKQADLFFPPDFVDDFPVAMQISHKYSLIYVITKLGLLFVYDL
ETATAVYRNRISPDPIFLTAEASVAGGFYAINRRGQVLLATVNEAMIVPFVSAQLNNLEL
AVNLAKRGNLPGAENLVVQRFQELFAQTKYKEAAELAAESPQGILRTPDTVAKFQSVPVQ
PGQTPPLLQYFGTLLTRGKLNAFESLELSRLVVNQNKKNLLENWLAEDKLECTEELGDLV
KTVDNDLALKIYIKARATPKVVAAFAERREFDKILIYSKQVGYSPDYLFLLQAMLRSDPQ
GAVNFALMMSQMEGGCPVDYNTITDLFLQRNLIREATAFLLDVLKPNLPEHSYLQTKVLE
INLVTFPNVADAILANGMFSHYDRPRIAQLCEKAGLYIRALQHYTELPDIKRVIVNTHAI
EPQALVEFFGTLSREWALECMKDLLLVNLRGNLQIIVQAAKEYCEQLGVDACVKLFEQFK
SYEGLYFFLGSYLSSSENPDIHFKYIEAAARTGQIKEVERVTRESNFYDPEKTRNFLMEA
KLPDARPLINVCDRFGFVADLTHYLYSNNMLRYIEGYVQKVNPGNAPLVVGQLLDDECSE
DFIKGLILSVRSLLPVEPLVEECEKRNRLRLLTQFLEHLVSEGSQDVHVHNALGKIIIDS
NNNPEHFLTTNPYYDPRVVGKYCEKRDPTLAVVAYRRGQCDDELINVTNKNSLFKLQARY
VVERMDGDLWEKVLNPENEYRRLLIDQVVSTALPESKSPEQVSAAVKAFMTADLPHELIE
LLEKIVLQNSAFSGNFNLQNLLILTAIKADPSRVMDYINRLDNFDGPAVGEVAVEAQLYE
EAFAIFKKFNLNVQAVDVLLDNIQSIDRAVEFAFRVEEDAVWSQVAKAQLREGLLSDAIE
SFIRADDATQFLEVIRAAEDANVYHDLVKYLLMVRQKAKEPKVDSELIFAYAKTDKLTDI
EEFILMPNVANLQNVGDRLYNETLYEAARIIFQFIANWAKLAITLVKLKQFQSAVDAARK
ANSAKTWKEVCFACVDAEEFRLAQICGLNIIIQVDDLEEVSEYYQNRGYFNELISLMESG
LGLERAHMGIFTELGVLYARYRPEKLMEHIKLFSTRLNIPKLIRACDEQQHWKELTYLYI
QYDEFDNAATTIMNHSPVAWDHMQFKDVAVKVANVELYYKAVHFYLQEHPDLINDLLNVL
ALRVDHTRVVDIMRKAGHLLLVKPYMIAVQSNNVSAVNEALNQIYMEEEDYERLRESIDL
HDNFDQIGLAQKVEKHELLEMRRVAAYIYKKAGRWKQSIALSKKDNLYKDAMETASQSGD
RELAEELLVYFIEKGKKECFASCLFVCYDLIRPDIALELAWMNNMIDFAFPYLLQFVREY
TGKVDELVKDKINAQNEVKTKEQEEKDVIAQQNMYAQLLPLALPAPPMPGMGGTTMGGGF
APPPPMGGMGMPPMPSFGMPPMGSY
NT seq
5118 nt
NT seq
+upstream
nt +downstream
nt
atggcggcagctaacgccccgatcaccatgaaagaagtcttaattttaccgtctatcggt
attagccctcaatttattacgtttacgaatgtaacgatggaatcggagaagtatatatgt
gtacgtgaaacagctccgcaaaatagtgttgtaattattgacatgcacatgccaatgcaa
ccgctgagacggcctatcactgcagattctgcactcatgaatccaaattctagaatcctt
gctttgaaagcccaacttccaggaactactcaggatcacttgcaaatatttaacattgag
atgaaagcaaaaatgaagtcataccagatgcctgagcagattgtcttttggaagtggata
accccaaagatgctgggcctggtcacacagacctccgtttatcattggtcaattgaaggt
gattctgaaccagtgaagatgtttgaaagaacagctaatttgcaaagcaatcagattata
aactataaatgtgacccttctgagaaatggttggttttgattggaattgctcctggttca
cctgagaggcaacaattggttaaagggaacatgcaacttttctctgtggatcaacaacgt
agccaagctcttgaagcacatgctgcatcatttgcacaatttaaggttccaggaaatgag
aacccttccactctcatttcttttgccacaaaatctttcaatgctggacaggttacatcg
aaattgcatgttattgagcttggtgcccagccagggaagccatcatttacaaagaaacag
gcagatctgttctttcctcctgattttgtcgatgactttcctgtggcaatgcagatatcc
cacaaatacagtttgatttatgtgatcacaaagcttgggctactatttgtttacgatttg
gagacagctactgctgtgtacagaaacagaattagtccagatccaatatttttgacagcc
gaggcttcagtggcggggggcttttatgccattaataggcgaggccaggtgttacttgct
actgtaaacgaggctatgattgtgccatttgttagtgcccagttgaacaatctggagctt
gctgtcaatcttgccaaaagaggaaaccttcctggtgctgagaatctggttgtccagcgt
ttccaagaactgtttgctcaaacaaagtataaagaagccgctgagcttgccgctgagtct
ccacaaggaattctccgaactcctgacacagttgccaagtttcagagtgtacctgtgcaa
cctgggcaaactcctcccttattacaatattttgggacccttttaacaagaggaaagctc
aatgcatttgagtcgttggaattgtcccgccttgtggtcaatcagaacaaaaagaacctt
ttggagaactggctggcagaggacaaattggagtgcaccgaggaactgggagaccttgtg
aagactgtggataatgatcttgcgctgaaaatatacattaaagccagggcaactcctaaa
gttgttgctgcttttgctgagagaagggagtttgacaaaatcttgatttactcaaagcag
gttgggtattctcctgactatttgttccttctgcaagcaatgctccgttcagatccacag
ggagcagttaactttgctttgatgatgtcccaaatggaaggtggctgtccagttgactac
aacacaattactgatctgtttcttcagaggaacttgatccgcgaggcaacagcctttctg
ttggatgttttgaagccaaatttaccagaacacagttacctccaaacaaaggttctggag
ataaatctggtaacatttcctaatgtagctgatgctattctagccaatggaatgtttagc
cactatgatcgccctcgaattgcacaactctgtgaaaaagctggtctctacatccgagcc
ctgcaacattatacggagttgcctgatattaaacgtgtgattgtgaatacacatgcaata
gagccacaggctcttgttgagttttttggaactctttcacgagaatgggctttggaatgc
atgaaggatcttctactggtcaatctaagaggcaaccttcagataattgttcaggctgcc
aaggaatattgtgagcagttgggtgttgatgcatgcgttaaactttttgagcaattcaag
tcatatgaagggctgtactttttcttggggtcatatctgagttccagtgagaatcctgat
atacattttaagtacatcgaggctgctgctagaacaggacaaataaaggaggttgagcgt
gttactagggaatcaaatttttatgatcctgaaaagacaaggaactttctaatggaagcc
aagcttccagatgcaaggcctttgattaatgtttgtgaccggtttggctttgttgctgat
ctcactcactacctctactcaaacaacatgcttcgctatatagaaggttatgttcaaaag
gtgaacccagggaatgcacctttagttgtggggcagctgttagatgatgaatgctctgaa
gactttatcaagggtcttattctttctgtccgttctttgcttccagtggagccccttgtg
gaggaatgtgagaagagaaatcgacttcgtttgcttactcagttcttggaacatcttgtg
agtgagggaagccaagatgtacatgttcataatgctctcggtaaaatcattattgatagc
aataacaacccagaacacttccttaccaccaatccttactatgatccacgggttgtgggc
aagtattgtgagaaacgtgatcctaccctggctgttgtggcttaccggagaggacaatgc
gatgacgaactcatcaatgtcacaaataagaactctttgttcaagttgcaagcaagatat
gtggttgaaaggatggacggtgatctttgggagaaggttcttaatcctgaaaatgaatac
cgaagactgcttattgatcaagttgtatctactgctttgccagaaagcaagagcccagaa
caagtttctgctgctgttaaagctttcatgacagctgatctgccccatgaattgattgag
cttcttgaaaagattgttctccaaaactctgctttcagtggaaatttcaatcttcaaaac
ttacttatcttgacagcaattaaggcagatccttcaagggtcatggattatattaataga
ttagataactttgatggacctgctgttggggaagtggcagttgaagctcagttatatgag
gaagcatttgcaattttcaagaagttcaacttgaatgttcaggctgtagatgtcttattg
gataacatccaaagcattgaccgtgctgtggagtttgcattccgtgttgaagaagatgct
gtttggagccaggtggcgaaggcccaactcagagaggggctcttgagtgatgcaattgag
tcatttatccgtgcagatgacgctactcaattcctggaagtcattcgtgctgctgaggat
gcaaatgtatatcatgacttggtgaagtaccttctcatggttaggcagaaggcaaaagag
ccgaaggtagacagtgagcttatttttgcatatgcaaagactgataagttgactgacatt
gaggagttcattctcatgcctaatgtggctaatctccaaaatgttggtgatcgcttatat
aacgaaactctatatgaggctgcaagaataatattccaatttatagcaaactgggccaaa
ttggcaatcacattagtgaagttgaaacagttccaaagtgctgttgatgcagctcggaaa
gccaacagtgcgaagacatggaaggaagtttgctttgcttgtgttgatgctgaggagttc
cgtttggctcagatatgtggtcttaacatcattatacaggtggatgatttggaggaggtc
agtgaatattaccagaacagaggatacttcaatgaattgatctctctcatggagagtggt
ttaggtttagaacgtgcacatatgggcattttcacagagttgggagtgctgtatgctaga
tatcgtcctgagaagcttatggagcacattaaattattctcaactcgtctcaatattccc
aagcttatacgagcatgtgatgaacagcaacattggaaggaacttacctatctgtacatt
caatatgatgaatttgataatgctgcaactaccattatgaaccattctcctgtggcctgg
gatcacatgcaattcaaagatgttgctgtcaaagttgctaacgtggagctatattataag
gctgtgcatttctacttgcaagaacatcctgatcttatcaatgatcttctcaatgtgctg
gcactccgtgtggaccatactcgtgttgttgacataatgcgaaaggcaggtcatttgctt
cttgtgaagccatatatgattgcagttcagagcaacaacgtgtctgctgtgaatgaggct
ttgaatcaaatttacatggaggaggaagactatgaaagattgcgtgaatccattgatttg
catgataactttgatcagataggccttgcacagaaggttgagaaacatgagcttcttgaa
atgagacgtgtggctgcatacatttacaagaaggctggaagatggaagcaatccattgca
ttgtcaaagaaagataacctatacaaagatgccatggagacagcatcacagtctggtgat
cgtgaacttgcagaggagttgctggtttatttcattgaaaagggcaagaaggaatgcttt
gcatcatgcctctttgtttgttatgatttaattcggccagacattgctcttgagcttgcc
tggatgaataatatgatcgactttgccttcccataccttttgcagtttgttcgtgaatac
acgggcaaagttgatgaacttgtgaaggacaaaattaatgcacagaatgaagtcaagacc
aaagagcaggaagagaaggatgtcattgctcagcagaacatgtatgctcagttacttcct
cttgctttgcctgcgccgccaatgcctggtatgggtggaacaacaatgggaggaggtttt
gctccaccaccacccatgggtggaatggggatgcctccaatgccatcttttggcatgcca
ccaatgggcagctattga
DBGET
integrated database retrieval system
