Populus alba (white poplar): 118055842
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Entry
118055842 CDS
T07314
Name
(RefSeq) uncharacterized protein isoform X1
KO
K08518
syntaxin-binding protein 5
Organism
palz
Populus alba (white poplar)
Brite
KEGG Orthology (KO) [BR:
palz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
palz04131
]
118055842
Membrane trafficking [BR:
palz04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
118055842
SNARE
VAMP, Ykt6, Sec22 (R)
Tomosyn
118055842
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_EML_2
WD40_CDC20-Fz
WD40_WDHD1_1st
ANAPC4_WD40
WD40_Prp19
WDR55
Beta-prop_RIG_2nd
PEP5_VPS11_N
Synaptobrevin
Beta-prop_HPS5
Beta-prop_IFT140_1st
Beta-prop_TEP1_C
EIF3I
WD40_like
KNTC1_N
CPSF_A
Motif
Other DBs
NCBI-GeneID:
118055842
NCBI-ProteinID:
XP_034923739
LinkDB
All DBs
Position
8:complement(4416452..4426927)
Genome browser
AA seq
1125 aa
AA seq
DB search
MFSKLFQKNTAQQQPTSPQQQPPPQPQPPPAKDNVSKGGLTLKDINPRIALHYGIPSTAS
VLAFDHIQSLLAIGTLDGRIKVIGGDNIEGLLVSPKTLPFKYLEFLQNQGILVSVSSDNE
IQVWDLEQRQIASTLQWDSNITAFSVIFASSYMYIGDEYGMVHVLKYNAEEVKLVPMPYH
VPADVAEVPDASGMSSPKNHSVVGVLPQPSSQGNKVLIAYEDGLMILWDVSEDKVVLVKG
NKDIELKCEITDSHKEIGHKLSDDRSDYEPLEKEIAALCWASTDGSVLAVGYVDGDILLW
NLSSTASATDKHAAKSSNDVVKLQLSTGDRRLPVIVLHWSSHRPHNECRGQLFIYGGDAI
GSEEVLTILSLDWSSGIESLKCIGRVDLTLNGSFADMVVLPSGGLMGTSGTLVLTNPGQL
HFYNDADLSSSTSLQETRNYVSSMQYPMVIPTIEPQLTAAKFGLVFRDGKFTKALSEAIS
ARKPQATHSSGNINWPLTGGVPSQLHDAEKYQVERLYIAGYQDGTVRIWDATYPTFALVY
VLGPEVKGINVADVNASVSALDFCSTTLCLAIGNECGTVRLYKLVCSADEMSLKFVTETE
KEVYTLDQEDGPQCTAVFSFLSSPIYALQFANSGTRLAVGFHCARVAMLDTSTSSVLFLT
DSLSSSSLPVKSLAVFSNCIDLINNSEDTGSTIVEDHVSLKVFAMTKDACIVVMNGNNGG
ILCSQSIKSATELMSPSIYIIDGGSYISEMSSGKHLSVSSQKSDTKSESAPAASRSESSP
PKVDHEASAKAAHFKQREENFLLLICCEDALHLHSLNEVDSDPIRKVNLMKPCCWSTPFK
KDDKECGIILLYQTGEIEIRSLPDLEVVVESSLMSILRWNFKTNMEKTICSSENAQIILV
NGCEFAAISLLASENHFRIPESLPCLHDKLLTAAADATISLSPNQKIIQGASSGILGGLI
KDFPGSKAEHHVDLLEVCKNDFAHLESIFSSPPFLKPSIDLADDQKVVELSIDDIDIDEP
LFVSPSSETKKNDTKDKGTERERLFEGASTDSQPKLRTADEIKAKYRKGDASAAAAHAKD
KLIQRQEKLERLSERTAELQSGAENFASMASELAKQMEKRKWWNI
NT seq
3378 nt
NT seq
+upstream
nt +downstream
nt
atgttttccaaactctttcaaaaaaacaccgcacaacaacaaccaacttcaccacagcaa
caaccaccaccgcaaccgcaaccaccacctgcaaaggataatgtgtcaaagggagggttg
acactgaaagatataaatccacggattgctctacactatgggatcccttccactgcgtct
gttttagcttttgatcacattcaaagccttttagcaattggaacactggatggaagaata
aaagtgatcggtggtgataacatcgaaggacttcttgtttctccaaagacattaccattc
aaatacttagagtttctacaaaatcaaggtatcctagtcagcgtgtcaagtgacaatgag
attcaggtttgggatttagagcaaagacaaattgcttccactttacaatgggactccaat
ataactgcattctctgtaatttttgcctcaagttacatgtatattggagatgagtatggg
atggtgcatgtattaaagtataatgccgaagaagttaaacttgtaccgatgccataccat
gttcctgcagatgtagcagaggtgccagatgcatctggtatgtcatcacctaagaatcac
tctgttgttggagttctgccccaaccttcttctcaaggaaacaaagtgttgattgcatat
gaggatgggttgatgattctttgggatgtctccgaagataaagttgttctagttaaaggg
aacaaagatattgaattgaaatgtgaaataactgattctcacaaagaaataggacacaag
ctttctgatgatagatcagactatgagccattggagaaagagatagctgccctctgttgg
gcatctactgatgggtcagttcttgctgttggttatgttgatggagatatattgttgtgg
aacctatcaagtactgcttctgctacagataagcatgctgcaaaatcatcaaacgatgtt
gttaagctacagttatccacaggtgacagaagactccctgtcattgttttgcattggtct
tcacacagaccgcataatgagtgtcgtggccagctctttatctatggtggtgatgcaatt
ggatctgaagaagttctaacgattttgagccttgattggtcttctggaatagaaagtcta
aaatgcattgggcgtgttgatcttactcttaatggttcttttgctgatatggttgtttta
cctagtggtggcttgatgggaacttcgggcactttggtattaactaatccaggacagctg
cacttttataatgacgctgacttgtcttcctcaacgtccctacaagagacaaggaattat
gtttcttcaatgcagtaccccatggtaatacctactatcgaaccacaattgactgcagca
aaatttggtctggtctttagagatggcaagttcacaaaggctctatctgaggcaatttct
gctagaaaacctcaagcaacacattcttctggaaatataaattggcctttgactggtgga
gttcctagccaacttcatgatgctgaaaaatatcaggttgagagattatatatagctggt
taccaagatggaactgtaagaatatgggatgccacctatccaacatttgcactcgtttat
gttttaggaccagaggtcaaaggtatcaatgttgctgatgttaatgcatcagtatctgct
ttggatttttgctccactaccttatgtttagctattggcaatgagtgtggtacggttcgt
ctatataagcttgtatgtagtgctgatgagatgagtttgaagtttgtgacagaaactgaa
aaagaagtctacactctggaccaagaggatggacctcaatgtacagctgtattttctttc
ctaagttctcctatatatgcattgcaatttgcaaattctggaaccagacttgctgtggga
tttcattgtgcccgggtagcaatgcttgacactagtacatcatctgttttatttctcacg
gacagtctatctagctccagtttgcctgtcaagtctctggctgtgttttcaaattgtatt
gacttaataaataattcagaagacactggatccacaattgtggaagatcatgtaagtttg
aaagtgtttgctatgaccaaagatgcctgtattgttgtcatgaatggaaacaatggtggt
attctctgctcccaatcaataaagtctgcaacggaacttatgtcaccttcaatatatatt
atagatggtggcagctacatctctgaaatgtctagtggaaaacatttatctgtttcatct
cagaaaagtgacactaaaagtgaatctgccccagctgcttctcgcagtgaaagttctcca
cctaaagttgaccacgaggcctctgctaaagcagcccactttaagcagagagaagaaaat
tttctgcttttgatttgttgtgaggatgcattgcatttgcattctttgaatgaggtggac
agtgatcctattcgaaaggtaaatctcatgaaaccatgctgttggagtacaccattcaag
aaggacgataaagagtgtgggatcattttactctatcagaccggagagattgaaattaga
tctttgccagatcttgaagtggttgtagaaagctctttaatgtcaatcctaaggtggaac
ttcaagactaatatggagaagacaatatgttcatctgaaaatgctcagattattctggtg
aatggatgtgaatttgctgctatatcgcttttggcctctgaaaaccacttcaggattcca
gagtcattgccttgcctgcatgataaactacttacagctgctgctgatgccacaatcagt
ttatctcccaatcagaagataatacagggtgcttcctctggtattttaggtggtttgatt
aaggatttcccagggagcaaggcagagcaccatgtagatcttcttgaagtttgtaagaat
gattttgctcatttagagagcatattttccagccctcctttcttaaagccttctatcgac
cttgcggatgaccaaaaagttgtggagcttagcatagatgacattgatattgacgaacct
ctatttgtctcaccttcatctgaaacgaagaagaatgatactaaagataagggaacagaa
agggaaagattatttgaaggtgcaagtactgattcacagccaaagctcagaacagccgat
gaaattaaggctaaatataggaagggggatgcctctgctgcagctgcacatgcaaaggac
aagctcatacaacgccaggaaaaacttgagaggctcagtgagcggacagcggagctgcaa
agtggggccgaaaactttgcatcaatggcaagtgaacttgccaagcaaatggagaaacgc
aaatggtggaacatatga
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