Populus alba (white poplar): 118055912
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Entry
118055912 CDS
T07314
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 18 isoform X1
KO
K14809
ATP-dependent RNA helicase DDX55/SPB4 [EC:
5.6.2.7
]
Organism
palz
Populus alba (white poplar)
Brite
KEGG Orthology (KO) [BR:
palz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
palz03009
]
118055912
Enzymes [BR:
palz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
118055912
Ribosome biogenesis [BR:
palz03009
]
Eukaryotic type
Pre-60S particles
Helicases
118055912
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Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
CTE_SPB4
ResIII
PPARgamma_N
Motif
Other DBs
NCBI-GeneID:
118055912
NCBI-ProteinID:
XP_034923839
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Position
8:complement(4670433..4675041)
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AA seq
592 aa
AA seq
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MDTTESSNPNRALTNTRFSDLKPSISEPVLEALTNSGFDYCTPVQAATIPLLCSYKDVAV
DAATGSGKTLAFVVPLVEILRRSSSPKPHQVMGIIISPTRELSSQIYNVAQPFIATLSNF
KSMLLVGGMDVKADVKMIEEEGANLLIGTPGRLYDIMDRVDVLDFRNLEVLILDEADRLL
DMGFQKQLNSIISRLPKLRRTGLFSATQTEAVEELSKAGLRNPVKVEVRAETRSLNNSVS
GQQLAPSKTPSGLLLEYLECEADKKPSQLVDLLVKNKSKKIIIYFMTCACVDYWGVVLPR
LTVLNGFSLISLHGKMKQTAREKALTSFTSLTSGILLCTDVAARGLDIPGVDCIVQYDPP
QDPNVFVHRVGRTARLGRQGSSIVFLLPKEEAYVEFLRIRRVPLLERKCVDDAPDVVPQI
RSAAKKDRDVMEKGLRAFVSYIRAYKEHHCSYIFRWKELEVGKLGMGYGLLQLPSMPEVK
HHSLSTKDFTPVDDLNLEEIKYKDKSRQKQRRKNLEAKKEARLQESKPQKVIKTPSAAAT
VMRKKTAKQRRAAQTVEDEEELAREYRLLKKLKKGTIDESEFEKLTGTDELL
NT seq
1779 nt
NT seq
+upstream
nt +downstream
nt
atggacaccaccgaatcatcgaacccaaacagagcattaacgaacacccgcttctccgat
ttaaagccttcaatatccgagccagttctcgaagccttaaccaattctgggttcgactac
tgcacaccggttcaagccgctactattcctttactatgcagctacaaagacgtagcagtc
gacgccgccactggatccggaaaaactctagcttttgttgtacctctcgtcgaaattctt
cgccgatcctcttctcccaaacctcaccaggtgatgggaataattatttctcctacaagg
gagttatcgtcgcaaatatataatgttgcacaaccttttattgcaaccttatcaaatttt
aagtccatgctacttgttggaggcatggatgtaaaagctgatgtgaagatgatagaggag
gaaggggctaatttattgataggaacacctgggaggctgtatgatataatggatcgtgtg
gatgtcttggactttagaaacctcgaggttttgattttagatgaggctgataggctattg
gatatgggattccagaagcagctaaactccattatatctcgcttacccaagcttcgtaga
actggccttttctcagctactcaaaccgaggctgttgaagagctatccaaagctggactg
aggaatcctgtgaaagttgaagttcgagctgaaacaagatcattaaataactcagtgtct
ggtcaacaattagcaccttccaaaacaccatcaggccttctacttgagtatctggaatgt
gaagcagataagaaaccgtctcagcttgttgatctccttgttaagaacaaatctaaaaaa
attatcatatacttcatgacatgtgcttgtgtcgattactggggggttgttcttccacgt
ctcacagtattgaacggtttctctctgatatctcttcatgggaagatgaagcagacagca
agagagaaagcattgacttcatttacatctctcacaagtggcatccttctgtgcactgat
gttgctgcacgtggacttgacattcccggtgtggactgtattgtgcagtacgacccccct
caagacccaaatgtctttgttcatagagttggtcgaactgctcggttgggtagacaagga
agttccattgtttttctgttgccaaaggaggaagcttatgtggaattcctgcgcataaga
agggttcctcttctggaaaggaaatgtgtagatgatgcaccagatgttgttcctcagata
cgatctgctgctaaaaaggaccgtgatgtcatggagaaaggactgagagcatttgtttcg
tacattcgtgcatataaagaacaccactgctcttacattttcaggtggaaagaacttgaa
gttgggaagttgggcatgggatatggcttattacagctcccatcaatgccagaggtaaag
caccactcactttcaaccaaggatttcactccagttgacgacctcaatttagaggagatc
aagtacaaggataaatctcgtcagaaacaaagacggaaaaatttggaagccaagaaagaa
gcacggctgcaagaatcaaaaccccaaaaggtaatcaagacccccagtgctgcagctact
gtcatgagaaagaaaactgctaagcagagacgagctgcccagacagttgaggatgaagaa
gagttggctcgggaatatcgattattgaaaaaactgaagaaggggacaattgatgaaagt
gaatttgaaaagttgacaggaaccgatgaactactttga
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