Populus alba (white poplar): 118055944
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Entry
118055944 CDS
T07314
Name
(RefSeq) exopolygalacturonase
KO
K01213
galacturan 1,4-alpha-galacturonidase [EC:
3.2.1.67
]
Organism
palz
Populus alba (white poplar)
Pathway
palz00040
Pentose and glucuronate interconversions
palz01100
Metabolic pathways
Module
palz_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
palz00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
118055944
Enzymes [BR:
palz01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.67 galacturonan 1,4-alpha-galacturonidase
118055944
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Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
Motif
Other DBs
NCBI-GeneID:
118055944
NCBI-ProteinID:
XP_034923866
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Position
19:16233447..16235363
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AA seq
398 aa
AA seq
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MANKKMGLEVVSYAIISFSVVLLLASTTQAQSNGVFDVTKYGAGKDITEALTNAWKSACA
STKASKVLIPSGTYWLRRVTLAGPCKAAIKLQVDGILQAPVDPDKLSGGHWVNFRYIDQF
TLSGRGTFDGQGKVAWSKSTCQKYKDCDSLPMNIRFDFITNALVRDITSRDSKNFHVNVL
GCRNLTFQHFTVRAPGESVNTDGIHIGRSTGIYIIDSKIGTGDDCISVGDGTEELHITGV
TCGPGHGISVGSLGKYPNEKPVSGIFVKNCTISDTTNGVRIKSWPNLYGGVASNMHFEDI
VMNNVQNPVIIDQVYCPWNQCSLKAPSKVKISDVSFKSIRGTSATPVAVRIACSSGFPCQ
NVKLANINLAYRGPGGPAKSQCSNVKPIISGIMSASGC
NT seq
1197 nt
NT seq
+upstream
nt +downstream
nt
atggctaacaaaaagatgggcttggaagttgtgtcatatgcaataatatcattctcagta
gtcttattgttagcatcaactactcaagcccagtcaaatggtgtcttcgatgtgactaaa
tatggtgccggtaaagatatcacggaggctttaaccaatgcttggaaatctgcttgtgct
tcaacaaaggccagtaaagttcttattccaagtggaacatactggttacggagagtaaca
ctagcaggtccttgcaaggctgcgatcaagctccaagttgatggtatattgcaggcaccg
gttgacccagataagctgtcaggaggtcattgggttaatttcagatacatagatcaattt
acattgtcgggaagaggtacttttgatgggcagggaaaggttgcatggagcaaaagtaca
tgtcagaaatataaagattgtgacagcctcccaatgaatataaggttcgatttcatcacc
aatgcattagtccgagatataactagtcgagatagcaagaactttcatgttaacgtcttg
gggtgcagaaacctcaccttccagcattttaccgtgagagcacctggtgagagtgtaaac
accgatggaatccacatcggccgatctactgggatctacattatcgattcaaaaattggc
acaggcgatgattgtatctccgtgggggatggcaccgaggaactacacatcacaggagta
acatgtggacctggccatggcatcagtgttggaagtttagggaaatatcccaatgagaaa
cctgtgtctggaatatttgtcaagaactgcaccatctcggatactacaaatggtgttaga
ataaaatcttggccaaatttatacggtggtgtcgcatctaacatgcattttgaggatatt
gtcatgaacaatgtccaaaaccctgtcatcatagatcaagtgtattgcccatggaaccaa
tgcagtctaaaggctccatcaaaagtgaagatcagtgatgttagttttaagagcataagg
ggaacttctgcaactccggttgctgttcggattgcttgcagtagtggcttcccatgtcag
aatgtgaagcttgctaacattaaccttgcatatagaggaccaggaggccctgcgaaatcc
caatgctctaacgttaagcccataatttctgggataatgagcgcatctggatgttga
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