Populus alba (white poplar): 118055945
Help
Entry
118055945 CDS
T07314
Name
(RefSeq) exopolygalacturonase-like
KO
K01213
galacturan 1,4-alpha-galacturonidase [EC:
3.2.1.67
]
Organism
palz
Populus alba (white poplar)
Pathway
palz00040
Pentose and glucuronate interconversions
palz01100
Metabolic pathways
Module
palz_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
palz00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
118055945
Enzymes [BR:
palz01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.67 galacturonan 1,4-alpha-galacturonidase
118055945
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
Motif
Other DBs
NCBI-GeneID:
118055945
NCBI-ProteinID:
XP_034923867
LinkDB
All DBs
Position
19:16189391..16191160
Genome browser
AA seq
393 aa
AA seq
DB search
MGLKVVSSAIISFSVFLLLASAAKAQSKGVFDVTKYGADKDITEALTNAWKDACASTNPS
KVLIPSGTYSLRKLTLAGPCKAAIELQVDGILKAPVDPNQFSGGHWVNFGYVDKFTLSGS
GTFDGQGKAAWSKSTCQKDKDCDSLPMNIRFDFITNALVRDITSRDSKNFHVNVLGCRNL
TFQHFTVSAPGESVNTDGIHIGRSTGIYIIDSKIGTGDDCISVGDGTEELHITGVTCGPG
HGISVGSLGKYPNEKPVSGIFVKNCTISDTTNGVRIKSWPALYGGAASNMHFEDIVMNNV
QNPVIIDQVYCPWNQCSLKAPSKVKISDVSFKNIRGTSATPVVVQIACSSGIPCDKVQLA
DIKLAYSGPDGPAKSQCSNVKPIISGIMSASGC
NT seq
1182 nt
NT seq
+upstream
nt +downstream
nt
atgggcctgaaagttgtatcctcagcaataatatcattctcagtatttttattgttagca
tcagcagctaaagcccaatcaaaaggtgtcttcgatgtgactaaatatggtgccgataaa
gatatcacagaggcattaaccaatgcttggaaagatgcttgtgcttcaacaaaccccagc
aaagttcttattccaagtgggacatactcgttacggaaattgactctagcaggtccttgc
aaggctgcgattgagctccaagttgatggcatattgaaggcaccggttgacccaaatcag
ttctcaggaggtcattgggttaatttcggatacgtagataaatttacattgtcgggaagc
ggcacttttgatgggcagggaaaggctgcatggagcaaaagtacatgtcagaaagataaa
gattgtgacagcctcccaatgaatataaggttcgatttcatcaccaatgcattagtccga
gatataactagtcgagatagcaagaactttcatgttaacgtcttggggtgcagaaacctc
accttccagcattttaccgtgagtgcacctggtgagagtgtaaacaccgatggaatccac
atcggccgatctactgggatctacattatcgattcaaaaattggcacaggcgatgattgt
atctccgtgggggatggcaccgaggaactacacatcacaggagtaacatgtggacctggc
catggcatcagtgttggaagtttagggaaataccccaatgagaaacctgtttctggaata
tttgtcaagaactgcaccatctcagatactacaaatggcgttagaataaaatcttggcca
gctttatacggtggtgccgcatctaacatgcattttgaggatattgtcatgaacaatgtc
caaaaccctgtcatcatagatcaagtgtattgcccatggaaccaatgcagtctaaaggct
ccatcaaaagtgaagatcagtgatgttagttttaagaatataaggggaacttccgcaact
ccggttgttgttcagattgcttgcagcagtggcatcccatgtgacaaggtgcagcttgct
gacattaaacttgcatatagcggaccagacggccctgcaaaatcccaatgttctaacgtt
aagcccataatttctgggataatgagcgcatccggatgttga
DBGET
integrated database retrieval system
