Populus alba (white poplar): 118056296
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Entry
118056296 CDS
T07314
Name
(RefSeq) nibrin homolog
KO
K10867
nibrin
Organism
palz
Populus alba (white poplar)
Pathway
palz03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
palz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
118056296
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
palz03032
]
118056296
03400 DNA repair and recombination proteins [BR:
palz03400
]
118056296
DNA replication proteins [BR:
palz03032
]
Eukaryotic type
DNA Replication Termination Factors
MRN complex
118056296
DNA repair and recombination proteins [BR:
palz03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
MRN(MRX) complex
118056296
BRCA1-C complex
118056296
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FHA
BRCT
PTCB-BRCT
Yop-YscD_cpl
Motif
Other DBs
NCBI-GeneID:
118056296
NCBI-ProteinID:
XP_034924362
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Position
15:complement(4898465..4908023)
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AA seq
517 aa
AA seq
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MVWGLFPVDPLSGEDKYYIFTKGVYKVGRKGCDVIICKDKGVSRIHAEVVVDEMISMDHP
LHMKSDLPSRILIRDCSKYGTYINKEKVHKFLNKETFLKDGDVVSFGTGTAVYRFCFVPL
VFFVYCSESFQVDQLLRDKVSSIGACITYNLSEECTHVLADELMPVQEDLVDAIVSKKPI
VLRSWVELVAEKRIGLEIPSWSSYIPTMTVEGVSVKVAASGTRAKCLEGFTCLLESINMY
KFKDRLQSLLEVCGAKIVFVEEFCSNAKGLDCGQDSHVVCVIPRGSPDKFNLFNKLGSLS
RVNELDLLRAVLAGHLDLSVLVSPSVLVSSSCSTDETVVADSEAEVETPTSEHFTADISN
EEAPKYVNKLEMAIDPHLRSENNHVVSSAYSIGNMTAKRETVDEAESGNSDIIYSQDLII
RDLNLPAQISSTPNNEVLNFKRFRKGNTQSGNSFNNLIPFSKYPYKDFDYGNQDMLESVK
EEKRRKQMEAIAEDLFNTEKGRRRGVAGSLHGLLTRG
NT seq
1554 nt
NT seq
+upstream
nt +downstream
nt
atggtgtggggtctttttccggtcgatcctctttcaggtgaagacaaatattatatcttt
acaaaaggtgtctacaaagttggccgaaaaggttgtgatgtaattatttgcaaagacaaa
ggtgtttctcgaatccatgcagaagtagttgttgatgaaatgatttcaatggatcatcct
ctgcacatgaaatctgacctaccctcccgaattctgattagagattgctccaagtatgga
acatacattaacaaggaaaaggtacataagttcctaaataaagaaacatttttaaaagat
ggagatgtggtttcctttggaactggtactgccgtctacaggttctgttttgttccactc
gtatttttcgtctactgttccgagtcctttcaagtggatcagcttcttcgagacaaagtc
tcatcaattggtgcttgcattacctacaatttgagtgaagagtgcacacatgttcttgct
gatgagctcatgccagttcaagaagatcttgttgatgctattgtgtctaagaaacctatt
gttctcaggagttgggttgagttggttgcagaaaaaaggattggattagaaattcctagc
tggagctcctatattccaacaatgacagtggaaggagtatcagtcaaagttgcagcatca
ggaactcgtgctaagtgtttggaaggattcacctgtttactggaatcaataaatatgtac
aagttcaaggacaggttgcagtctctgttggaagtatgcggtgcaaagattgtttttgta
gaagaattctgttcaaatgccaaaggtttggattgtgggcaagacagtcatgtggtatgc
gtcatccccagaggatcaccagacaagtttaatttgttcaacaagctgggttcattgtct
agagtgaatgagttggatctgttaagagctgttttagctgggcatctagacttgtctgtt
ttggtatcaccatctgttcttgtttcatcatcatgctctactgatgagacagtagtagca
gattccgaggcagaagtggaaacaccaacatcagagcatttcactgcagatatctccaat
gaagaagcgccaaaatatgtgaacaaactggaaatggcaattgaccctcatcttagatca
gaaaataaccatgttgtaagctctgcttacagtattggtaacatgacagcaaaacgagaa
acagttgatgaggctgaaagtggaaattctgatattatttatagccaagatttaatcatt
agagatttgaatttacctgctcaaatcagttcgactccaaataatgaagttttgaatttc
aaacgcttcagaaagggtaacactcaatcagggaatagtttcaacaatctgattccattc
tcgaaatatccatacaaagattttgactatgggaatcaggatatgctcgagtctgtgaag
gaagaaaaaaggcgaaagcaaatggaagcaattgcagaggacttattcaacactgaaaag
ggaaggcggcgtggagttgctggttctcttcacggacttcttacacgtggctga
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