Populus alba (white poplar): 118056402
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Entry
118056402 CDS
T07314
Name
(RefSeq) ABC transporter B family member 28
KO
K05657
ATP-binding cassette, subfamily B (MDR/TAP), member 10
Organism
palz
Populus alba (white poplar)
Pathway
palz02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
palz00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
118056402
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
palz02000
]
118056402
Transporters [BR:
palz02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB2, 3, 8, 9, 10 subgroups
118056402
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
ABC_ATPase
AAA_16
AAA_29
AAA_21
AAA_22
AAA_5
RsgA_GTPase
Zeta_toxin
AAA_15
AAA_30
AAA_25
AAA_28
Motif
Other DBs
NCBI-GeneID:
118056402
NCBI-ProteinID:
XP_034924490
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Position
15:4275326..4281405
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AA seq
720 aa
AA seq
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MASAAPPLLLQTLPTRILTPSLHAPAKLKFKLHPSSSPRLRQSRPFPPLLKRHRTATTIT
SAYVTGPASDPIVTEPDHKLDPTNDESSVTEKVQSTELISWGLLWTLLAKHKARLVICAF
TLAGCTSCTLSMPIFSGRFFEVLIGARPEPLWRLLSKIGVLYALEPIFTVIFVVNMNTVW
EKVMATLRAQIFRRVLIQKVEFFDRYKVGELSALLTSDLGSFKDIVSENISRDRGFRAFS
EVTGTICILFALAPQLAPILGVLMFAVSFSVAVYKRSTVPVFKAHGKAQASISDCVTETF
SAIRTVRSFGGEKHQMLNFGSQVLAYQRSGIKLGAFKSVNESLTRVAVYISLLTLYSLGG
SRVKAGLLSVGTIASFIGYTFTLTFAVQGLVNTFGDLRGALAAIERINSVLSGAEIDEAL
AYGLERQIQKKEVHDEKISLFLVDGYGGQNQIYNAHYMSALKSANTLCSFAGSGDVCLED
VHFSYPLRPDVQILNGLNLTLKCGTVTALVGSSGSGKSTIVQLLARFYEPTRGRITVSGE
DVRTFEKTEWVEVVSIVNQEPVLFSVSVGENIAYGLPDDNVSKDDIIKAAKAANAHEFII
SLPQGYDTLVGERGGLLSGGQRQRIAIARALLKNAPILILDEATSALDAVSERLVQDALD
QLMKGRTTLVIAHRLSTVQNANQIALCSGGRIAELGTHSELLDKKGQYASLVGTQRLAFE
NT seq
2163 nt
NT seq
+upstream
nt +downstream
nt
atggcctctgcagctcctcctctcctcctccaaacactccccactcgcatcctcacccca
tctctccacgcgccagccaaactcaaattcaaactccatccctcctcctctcctcgtctc
cgccaatcccggcctttcccgccattactaaaacggcaccggactgcaacgacaatcact
tctgcttacgtgaccggaccagcatccgacccgattgtgaccgaaccggaccacaaactc
gacccgaccaatgacgagtcgtctgtaacggagaaggttcagtcaacggaactgataagt
tggggtcttttgtggactctgttggctaagcataaagcacgactcgtcatttgtgctttc
actcttgctggttgcacctcttgtactctctccatgcctatattttcagggagatttttt
gaggtgttgattggtgcgagaccggagcctctatggaggttgcttagtaagattggagtg
ttatacgctttggaaccgatttttacagtgatctttgttgtaaacatgaatacagtatgg
gagaaggttatggcaacactgagagctcagatttttagaagggtcttgattcagaaggtg
gagttttttgatagatacaaggttggtgaacttagtgctctgttgacgtctgatttgggt
tcgtttaaagatattgtgagcgagaacatttcgagggatcgtggatttagggcattttct
gaggtcactggaaccatatgcatactgtttgctctggccccccaactagcaccgattctg
ggggttttgatgtttgccgtgtctttttcagttgctgtatacaagcgatcaactgtacct
gttttcaaagctcatggaaaggcccaggcatccatatctgattgtgtgacggaaaccttt
tctgctatccgtactgtgagatcctttggtggtgaaaagcaccaaatgctaaactttggc
agccaggttcttgcttatcaaagaagtggtataaagctcggggctttcaaatccgtgaat
gaatcattgacaagggttgctgtatatatttcgttgctgactttatacagtcttggagga
agcagagtaaaggctggtttactctctgttggaactattgcttctttcatcggatacact
ttcacattaacttttgctgttcaagggctggtcaatacattcggagatcttcgcggagca
cttgctgccattgagaggattaattctgttttatctggagcagaaattgatgaggccctt
gcctatggtttagaaagacaaatccagaaaaaagaagtacatgatgagaaaattagtttg
ttcttagttgatggttacggtggacagaatcaaatttataatgcacattacatgtcagcc
ctaaaatcagccaacaccttgtgtagctttgctgggtctggtgatgtttgtcttgaagat
gtgcacttctcttaccctttacgacctgatgtgcaaatcttgaatggtcttaatttgact
ctgaaatgtggaactgtgaccgctctagtgggctctagtggttcaggcaaaagtaccata
gtacaactattggcacgcttttatgagccaaccagaggtcggattacagtttcaggagag
gatgtccgaacatttgaaaagactgaatgggtggaggtcgtctccatcgtgaatcaggaa
cctgttcttttctcggtatctgttggagaaaatatcgcatatgggcttccagatgataat
gtatcgaaagacgatataataaaggctgccaaagctgcaaatgctcatgaatttataata
tcacttccacagggttatgacactctagttggtgagcgtggaggcttactgagtggagga
cagaggcagagaattgctattgcaagagctctgctcaagaatgcaccaatattaatactt
gatgaggccactagtgcacttgatgcagttagtgaacgtcttgtccaggatgctctggac
caactaatgaagggcagaacaacattggtgattgcccataggttaagcacagttcagaat
gctaatcagattgcgctttgttctggtgggaggattgcagaactagggacccactctgag
ttgctagataagaagggtcaatatgcttcattagttggcactcaaagactggcatttgag
tga
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