Populus alba (white poplar): 118056585
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Entry
118056585 CDS
T07314
Name
(RefSeq) DNA mismatch repair protein MLH1 isoform X1
KO
K08734
DNA mismatch repair protein MLH1
Organism
palz
Populus alba (white poplar)
Pathway
palz03430
Mismatch repair
palz03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
palz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
118056585
03460 Fanconi anemia pathway
118056585
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
palz03400
]
118056585
DNA repair and recombination proteins [BR:
palz03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
MutL homologs
118056585
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mlh1_C
DNA_mis_repair
HATPase_c_3
HATPase_c
Motif
Other DBs
NCBI-GeneID:
118056585
NCBI-ProteinID:
XP_034924723
LinkDB
All DBs
Position
19:complement(18102690..18115175)
Genome browser
AA seq
747 aa
AA seq
DB search
MEAGEHSPPTSPETDLMEIKTEKTPYTPSEPPKIHRLDESVVNRIAAGEVIQRPVSAIKE
LVENSLDAHSTSINVVVKDGGLKLIQVSDDGHGIRREDLPILCERHTTSKLTNYEDLQSI
KSMGFRGEALASMTYVGHVTVTTITPGKLHGYRVSYRDGVMEDEPKPCAAVKGTQIMVEN
LFYNMIARRKTFQNSADDYSKIVDLLSRFAIHHINVSFSCRKHGASRADVHSVTTSSRLD
SIRSVYGVSVAVNLMKIEVPDSDPSSSVFNMDGLISNSNYVAKKTTMVLFINDRLVECTA
LKRAIEIVYAATLPKASKPFIYMSIVLPPEHVDVNVHPTKREVSLLNQEFIINTIQSAVE
SKLRNSNEARTFQEQTLDSSPSVPLSAKKDSNVNPSPSPYGSKSQKVPVNKMVRTDASDP
AGRLHAYLQARPVDNLEGNSSLAAVRSSVRQRRNPKESADISSVQELVNDIDGNCHSGLL
DIVRNCTYIGMADDVFALLQYKTQLYLANVVNLSKELMYQQVLRRFAHFNVIQLSDPASL
RLLIMLALKEEDLDLESNENEDLREKIAEMNTELLKDKAELLEEYFCIYIDSHGNLSRLP
VILDQYTPDMDRIPEFVLSLGNDVDWEDEKNCFQTIAAAVGNFYAMHPPLLPSPSGDGLQ
FYRRRKPEKNPDDKEKATDIDVEMEDELEHELLSEAETAWAQREWSIQHVLFPSMRLFLK
PPTSMATNGTIVQVASLEKLYKIFERC
NT seq
2244 nt
NT seq
+upstream
nt +downstream
nt
atggaagccggtgaacactcacctccaacatcaccggaaaccgacctaatggaaataaaa
acagaaaaaacaccatacacaccatcagaaccaccaaaaatccaccgtctagatgagtcc
gtggtcaaccgaatcgccgccggagaagtaattcaacgccctgtttcagccatcaaagaa
ctagtagaaaacagccttgacgcgcactctacctctataaacgtcgttgttaaagacggt
ggccttaaactcattcaagtctccgatgacggccacggcattcgccgtgaggatttgcct
atattatgcgagaggcatacgacgtcgaagctgacgaattacgaggatttacagtcgatt
aagtcaatgggattcagaggagaggcattggccagcatgacttatgtaggtcatgtgact
gtcactactattactccaggaaaattgcatggttacagggtttcgtatagagatggggta
atggaggatgagcctaagccttgtgctgcagttaaagggacgcagataatggtagaaaac
ttgttctataacatgattgctaggagaaagacattccagaattctgcagatgattattcc
aaaatagtggacttgctaagccgatttgcgattcatcatattaacgtgagcttttcttgc
agaaagcatggagcatccagagcagatgtccactcagtcaccacatcatcaaggcttgat
tccatcagatctgtttatggagtttctgttgctgtcaatctaatgaaaatagaagttcca
gacagtgatccttcaagttcagtttttaatatggatggactcatttccaattcaaattat
gtggcgaagaaaacaacaatggttctttttatcaatgatagactagtggaatgcactgct
ttaaagagagctatcgaaattgtttatgctgctaccttaccaaaagcttcaaaacctttc
atatacatgtcaatagtattgccacctgagcatgttgatgtgaatgtgcatccaacaaag
agagaggtaagccttctgaaccaggaattcattattaacacgatacaatctgctgttgaa
tcaaaattgaggaactcaaacgaggctaggacatttcaagaacagacattggattcctct
ccaagtgttcctttaagtgcaaaaaaggattcaaatgttaacccctcaccctcgccttat
gggtcaaaatcgcaaaaagttccggtgaataaaatggtaagaactgatgcatcggatcct
gctggaaggctgcatgcctatttgcaagccaggcctgttgataatcttgaagggaattct
agcttggcagctgtgaggtcctcagttagacaaagaagaaaccccaaggaaagtgcagat
atttcttctgttcaggagcttgttaatgatattgatggaaactgtcattcaggtctgctg
gatattgtcagaaactgcacatatattggaatggcagatgatgtttttgcattgcttcag
tataaaacgcagctgtatcttgcaaatgtagtgaacttaagcaaagagctcatgtatcag
caagttctacgacgatttgctcatttcaatgtcatacaactgagtgatccagcctctctt
agattgctcattatgttggcattgaaggaagaagacttggatctagaatccaatgaaaat
gaagacctgagagagaagattgcagaaatgaacactgaactgctaaaggataaggcagaa
ctgctagaggagtatttctgcatatacattgactcacatgggaatttgtctcggcttcca
gtcatacttgaccaatatacacctgacatggatcggattcctgaatttgtacttagtttg
ggaaatgatgttgattgggaggatgaaaagaattgctttcaaacaattgcggctgctgtt
gggaacttctatgccatgcatcctcctctattgcccagtccctcaggtgatggtttacaa
ttttacagaagaaggaaacctgaaaagaatcccgatgataaagaaaaagcaactgacata
gatgttgaaatggaggatgaacttgagcatgaattgctgtctgaggcagagactgcatgg
gcccagcgtgaatggtcaatacagcatgtattgtttccttccatgagactctttttaaag
ccaccaacttcaatggctacaaatgggacaattgttcaggtagcttcattggagaagctt
tacaagatatttgagagatgctaa
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