Populus alba (white poplar): 118056793
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Entry
118056793 CDS
T07314
Name
(RefSeq) heterogeneous nuclear ribonucleoprotein 1 isoform X1
KO
K14411
RNA-binding protein Musashi
Organism
palz
Populus alba (white poplar)
Pathway
palz03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
palz00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
118056793
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
palz03019
]
118056793
Messenger RNA biogenesis [BR:
palz03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
118056793
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_PARP14_3
Motif
Other DBs
NCBI-GeneID:
118056793
NCBI-ProteinID:
XP_034925033
LinkDB
All DBs
Position
1:complement(40895034..40899107)
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AA seq
485 aa
AA seq
DB search
MQGMESDLGKLFIGGISWDTDEERLKEYFSKYGEVVEAVIMRDRVTGRARGFGFVVFADP
IVAERVIMEKHVVDGRTVEAKKAVPRDDQHILSRNTSSIHGSPGPGRTKKIFVGGLASTV
TENDFKKYFEQYGIITDVVVMYDHNTLRPRGFGFITYDSEEAVDRVLHKTFHELNGKMVE
VKRAVPKELSPGPSRSPLMGYNYGLTRANNFLNAYAQGYNMSSIGGFGMRMDSRFNPLAT
GRSGFAPFSNTGYGMSMNLEPALSPSYGGGSNFGNTPAYGRISSPYYSGNPSRYNTPVGY
GGGDARNDSTLNPTTWNVWGNGSHNTATNPASPGPLLGSGTGNFGVSFGNSGSNWGTSPV
SAQGRGSASGYTTGSMGYGSGDNNYGLGGAGYVRNSGTGAPPTSSFSGSAGGYEGSYGDL
YRSGSVYGDSTWQSATPELDGCGSFGYGLGDVASDVTTKSSEGYIGSYGVTSRQSNRGAG
VWLNR
NT seq
1458 nt
NT seq
+upstream
nt +downstream
nt
atgcaagggatggaatcagatcttggtaagctcttcattggtgggatttcatgggacact
gatgaggaacgtcttaaggaatattttagcaagtatggggaagtggttgaggctgtgatc
atgagagatcgtgttacaggccgtgcccgtggatttggttttgttgtctttgcagatcct
attgttgccgagagggtcatcatggagaagcacgtggttgatggccgcacagttgaagca
aagaaggctgttcctagggatgaccagcacattttaagtagaaacactagtagtattcat
ggttctccaggtcctggacgcaccaaaaagatttttgttggaggccttgcgtctacggtt
acagagaatgacttcaagaagtactttgagcagtatggtattattactgatgttgtagtg
atgtacgatcacaacactctgaggccaagaggctttggcttcatcacttatgattcagag
gaagcagtggacagagttctgcataaaacatttcatgaactcaatggtaaaatggttgag
gtcaagagggcagtcccaaaggagctatcaccaggtcctagtcggagccctctgatgggg
tataactatggtttgactagggccaacaacttccttaatgcatatgctcagggatataat
atgagttctattggaggttttggaatgaggatggatagtaggtttaatccactcgccact
ggtcgaagtggatttgctccctttagcaacactggttatgggatgagtatgaatttagag
ccagccttgagtccaagctatggtggaggttccaactttggtaacactcctgcatatggg
cggatctcaagtccttattatagtgggaatccaagcaggtacaacacaccagtaggttat
ggtgggggggatgcaagaaatgattctaccttaaaccctactacttggaatgtctgggga
aatggcagccacaatactgccacaaatcctgccagccctggtcctttattgggctccgga
actggaaattttggagtttcatttgggaatagtggatcgaattggggcacttctcctgta
tcagctcaaggcagaggaagtgcttctggctatactactggcagcatgggttatgggagt
ggtgacaacaattatggtttgggcggggcaggatatgtaagaaacagtggcactggcgca
ccaccaacatcatcattctctgggtcagctggtggttatgaggggtcctacggggacctt
tatcgcagtggttctgtttatggtgattcaacttggcaatctgctactcctgagcttgat
ggttgtggttcatttggttatgggctcggtgatgtagcttcagatgttacaactaagagc
tccgagggttatattggaagttatggtgttacaagtagacaatcaaatagaggtgcagga
gtctggttaaacaggtga
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