KEGG   Populus alba (white poplar): 118056827
Entry
118056827         CDS       T07314                                 
Name
(RefSeq) DNA damage-binding protein 1a
  KO
K10610  DNA damage-binding protein 1
Organism
palz  Populus alba (white poplar)
Pathway
palz03420  Nucleotide excision repair
palz04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:palz00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    118056827
  09124 Replication and repair
   03420 Nucleotide excision repair
    118056827
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:palz04121]
    118056827
   03400 DNA repair and recombination proteins [BR:palz03400]
    118056827
Ubiquitin system [BR:palz04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul4 complex
    Adoptor protein
     118056827
DNA repair and recombination proteins [BR:palz03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     Cul4-DDB2 complex
      118056827
    TCR (transcription coupled repair) factors
     Cul4-CSA complex
      118056827
SSDB
Motif
Pfam: Beta-prop_RSE1_2nd Beta-prop_RSE1_1st CPSF_A
Other DBs
NCBI-GeneID: 118056827
NCBI-ProteinID: XP_034925085
LinkDB
Position
1:complement(40318186..40329594)
AA seq 1088 aa
MSVWNYVVTAHKPTNVTHSCVGNFTSSQELNLIIAKCTRIEINLLTPQGLQPMLDVPIYG
RIATLELFRPHGEAQDFLFIATERYKFCVLQWDAETSELITRAMGDVSDRIGRPTDNGQI
GIIDPDCRLIGLHLYDGLFKVIPFDNKGQLKEAFNIRLEELQVLDIKFLHGCSKPTIVVL
YQDNKDARHVKTYEVALKDKDFIEGPWSQNNLDNGADLLIPVPPPFCGVLIIGEETIVYC
SANVFRAIPIRPSITKAYGRVDADGSRYLLGDHAGLLHLLVITHEKEKVTGLKIELLGET
SIASTISYLDNAFVFIGSSYGDSQLVKLNLQPDAKGSYVEVLDRYVNLGPIVDFCVVDLE
RQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQGIKGMWSLRSLTDDPFDTFLVVS
FISETRILAMNIEDELEETEIEGFCSQVQTLFCHCAVFNQLVQVTSSSVRLVSSTTRELR
QEWNAPSGYSINVATANATQVLLATGAGHLVYLEIGDGTLTQAKHAQLECEISCLDINPI
GENPNYSQLAAVGMWTDISVRIFSLPDLNLITKEPLGGEIIPRSVLLCSFEGISYLLCAL
GDGHLLNFLLNLSTGELKDRKKVSLGTQPITLRTFSSKNTTHVFAASDRPTVIYSSNKKL
LYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELSIGTIDDIQKLHIRSIPLGEHARRICH
QEQSRTFSICSMKNQSNAEESEMHFIRLLDDQTFEFISTYPLDTFEYGCSILSCSFSDDS
NVYYCVGTAYVLPEENEPTKGRILVFIVEDGKLQLIAEKETKGAVYSLNAFNGKLLAAIN
QKIQLYKWMLRDDGTRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGA
IEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVRKNSEGATDEERGRLEVVGEYHLG
EFVNRFRHGSLVMRLPDSDVGQIPTVIFGTVNGVIGVIASLPHEQYLFLEKLQSNLRKVI
KGVGGLSHEQWRSFNNEKKTVDAKNFLDGDLIESFLDLSRSRMDEISKAMEISVEELCKR
VEELTRLH
NT seq 3267 nt   +upstreamnt  +downstreamnt
atgagtgtctggaactatgtggtgactgctcacaagcccaccaatgtgacgcactcttgt
gtcggcaatttcaccagttctcaagagctcaatctcatcattgcgaaatgtacccgtatc
gaaatcaatctgcttactcctcagggattacagcctatgttagatgttccaatatatgga
cgaattgcaactctcgaacttttccggcctcatggtgaagctcaggactttttatttatt
gcaacagaaagatacaaattctgtgtgcttcagtgggatgcagagacgtctgagctaatt
accagagcaatgggggatgtatcagaccgtataggtcgcccaacagacaatggtcagatt
ggcataattgatcctgattgtagattaattggactccatttgtatgatgggttgtttaag
gtcattccttttgataataaaggacaactcaaagaggcttttaacataaggcttgaggaa
cttcaagttttggatatcaaatttcttcatggttgttcaaaaccaacgattgttgttctt
taccaggataacaaggatgcccgtcatgttaaaacatatgaggttgctttgaaagataaa
gactttattgagggtccttggtcgcagaacaatcttgacaatggtgctgatttgctaata
ccagtgcccccacctttctgtggtgttcttattattggagaagaaacaattgtatattgc
agtgccaatgtttttagagcgatcccaatcagaccttctatcacgaaagcatatggaagg
gttgatgctgatggttctaggtatttacttggtgatcatgctgggcttcttcaccttcta
gtcataacccatgagaaagaaaaggtcactggcctcaaaattgagctgttgggagaaact
tctattgcatctaccatatcatatctcgacaatgcttttgtctttattggttcaagctac
ggagattcacagcttgtaaagttaaatctgcaacccgatgcaaaaggttcatatgtagaa
gttctggacaggtatgtcaatttgggaccaattgttgacttctgtgtggtggacctggag
cggcaaggccaaggtcaggttgtcacttgctctggagcctataaggatgggtctcttcgg
atagttcgtaatggaataggaatcaatgaacaggcatccgtagagcttcaaggcatcaaa
ggaatgtggtcattaagatctttgactgatgatccatttgacacctttctggttgtaagt
tttattagcgagacaagaattttggcaatgaacattgaggatgagttggaggaaactgaa
atagagggtttctgttcacaagtgcagacattgttctgccattgtgctgtgttcaaccag
cttgtacaagttacatcaagctctgtaagactggtcagttctacaactagagagctcaga
caggaatggaatgctccatcaggttattcaataaatgtcgccactgctaatgccacccag
gttttattggcaactggtgctggccacctcgtctatctggaaatcggtgatgggacactg
acacaggcaaaacatgcacagttagagtgtgagatatcatgcctggacattaaccccatt
ggagagaatcccaactatagtcaactagctgcggttggaatgtggacagacataagtgtc
aggatattttcattgcctgatctaaatctcataacaaaggagccattgggaggagagata
ataccccgttctgttcttctatgttcctttgaagggatatcgtatttattatgtgccctt
ggagacggacacctcttgaacttcctactgaacttgagtactggcgagttgaaagatagg
aaaaaggtgtctttggggacccaacctataacactccgtactttctcatcgaagaatacc
acacatgtatttgctgcatcagataggccaactgtcatttacagcagcaacaagaaacta
ctttacagcaatgtaaacttgaaagaagtcagtcatatgtgtccttttaactctgctgca
tttccagacagccttgctattgcaaaagaaggggaactcagcattggcaccatcgatgat
atccaaaagcttcacatccgctctattccattgggtgaacatgcacggcgtatatgtcac
caggagcagtctcggactttctccatttgtagtatgaaaaaccaatccaatgcagaagaa
tctgaaatgcattttattcgattgttagatgatcaaacctttgagttcatatcaacatac
ccacttgacacatttgagtatggctgctccatacttagctgctccttttctgatgatagc
aacgtgtactattgtgttggaactgcatatgttttgccagaagaaaacgagccaaccaag
ggccgaatactggttttcatagtggaagatgggaagttgcagcttattgctgagaaggaa
acaaagggggcagtatactctttgaatgctttcaatggcaaactgctggctgctattaat
caaaagatccagttatacaagtggatgctccgagatgatggaacacgtgagctgcagtct
gagtgtgggcatcatgggcacatacttgccctctatgtacaaactcgtggagatttcatt
gttgttggtgatctgatgaagtcaatctccttgctaatctataagcatgaggaaggtgct
attgaggagcgagcccgtgattataatgcaaattggatgtcggcagttgagattcttgat
gatgacatttaccttggtgctgaaaataactttaacctattcacagttcggaaaaatagt
gaaggtgccactgatgaggaacgaggccgtcttgaggtggtcggtgagtatcaccttgga
gaatttgtaaatcgattccgacatggttcccttgtcatgcgcttgccagattccgatgtt
ggccagatcccaactgtcatttttgggactgttaatggtgtaatcggggtcattgcttca
cttcctcatgagcaatacctctttttggagaagctgcaatcaaacttaagaaaggtgata
aagggtgttggaggattgagccatgagcaatggagatcattcaacaatgagaagaaaact
gtagatgccaagaatttcttggatggagatcttatcgagtcattccttgatctcagccgt
agtcggatggatgagatatccaaggcaatggagatctccgtggaggagctttgcaagaga
gtggaagagctgacaaggctgcattga

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