Populus alba (white poplar): 118056827
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Entry
118056827 CDS
T07314
Name
(RefSeq) DNA damage-binding protein 1a
KO
K10610
DNA damage-binding protein 1
Organism
palz
Populus alba (white poplar)
Pathway
palz03420
Nucleotide excision repair
palz04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
palz00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
118056827
09124 Replication and repair
03420 Nucleotide excision repair
118056827
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
palz04121
]
118056827
03400 DNA repair and recombination proteins [BR:
palz03400
]
118056827
Ubiquitin system [BR:
palz04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Adoptor protein
118056827
DNA repair and recombination proteins [BR:
palz03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Cul4-DDB2 complex
118056827
TCR (transcription coupled repair) factors
Cul4-CSA complex
118056827
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_RSE1_2nd
Beta-prop_RSE1_1st
CPSF_A
Motif
Other DBs
NCBI-GeneID:
118056827
NCBI-ProteinID:
XP_034925085
LinkDB
All DBs
Position
1:complement(40318186..40329594)
Genome browser
AA seq
1088 aa
AA seq
DB search
MSVWNYVVTAHKPTNVTHSCVGNFTSSQELNLIIAKCTRIEINLLTPQGLQPMLDVPIYG
RIATLELFRPHGEAQDFLFIATERYKFCVLQWDAETSELITRAMGDVSDRIGRPTDNGQI
GIIDPDCRLIGLHLYDGLFKVIPFDNKGQLKEAFNIRLEELQVLDIKFLHGCSKPTIVVL
YQDNKDARHVKTYEVALKDKDFIEGPWSQNNLDNGADLLIPVPPPFCGVLIIGEETIVYC
SANVFRAIPIRPSITKAYGRVDADGSRYLLGDHAGLLHLLVITHEKEKVTGLKIELLGET
SIASTISYLDNAFVFIGSSYGDSQLVKLNLQPDAKGSYVEVLDRYVNLGPIVDFCVVDLE
RQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQGIKGMWSLRSLTDDPFDTFLVVS
FISETRILAMNIEDELEETEIEGFCSQVQTLFCHCAVFNQLVQVTSSSVRLVSSTTRELR
QEWNAPSGYSINVATANATQVLLATGAGHLVYLEIGDGTLTQAKHAQLECEISCLDINPI
GENPNYSQLAAVGMWTDISVRIFSLPDLNLITKEPLGGEIIPRSVLLCSFEGISYLLCAL
GDGHLLNFLLNLSTGELKDRKKVSLGTQPITLRTFSSKNTTHVFAASDRPTVIYSSNKKL
LYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELSIGTIDDIQKLHIRSIPLGEHARRICH
QEQSRTFSICSMKNQSNAEESEMHFIRLLDDQTFEFISTYPLDTFEYGCSILSCSFSDDS
NVYYCVGTAYVLPEENEPTKGRILVFIVEDGKLQLIAEKETKGAVYSLNAFNGKLLAAIN
QKIQLYKWMLRDDGTRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGA
IEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVRKNSEGATDEERGRLEVVGEYHLG
EFVNRFRHGSLVMRLPDSDVGQIPTVIFGTVNGVIGVIASLPHEQYLFLEKLQSNLRKVI
KGVGGLSHEQWRSFNNEKKTVDAKNFLDGDLIESFLDLSRSRMDEISKAMEISVEELCKR
VEELTRLH
NT seq
3267 nt
NT seq
+upstream
nt +downstream
nt
atgagtgtctggaactatgtggtgactgctcacaagcccaccaatgtgacgcactcttgt
gtcggcaatttcaccagttctcaagagctcaatctcatcattgcgaaatgtacccgtatc
gaaatcaatctgcttactcctcagggattacagcctatgttagatgttccaatatatgga
cgaattgcaactctcgaacttttccggcctcatggtgaagctcaggactttttatttatt
gcaacagaaagatacaaattctgtgtgcttcagtgggatgcagagacgtctgagctaatt
accagagcaatgggggatgtatcagaccgtataggtcgcccaacagacaatggtcagatt
ggcataattgatcctgattgtagattaattggactccatttgtatgatgggttgtttaag
gtcattccttttgataataaaggacaactcaaagaggcttttaacataaggcttgaggaa
cttcaagttttggatatcaaatttcttcatggttgttcaaaaccaacgattgttgttctt
taccaggataacaaggatgcccgtcatgttaaaacatatgaggttgctttgaaagataaa
gactttattgagggtccttggtcgcagaacaatcttgacaatggtgctgatttgctaata
ccagtgcccccacctttctgtggtgttcttattattggagaagaaacaattgtatattgc
agtgccaatgtttttagagcgatcccaatcagaccttctatcacgaaagcatatggaagg
gttgatgctgatggttctaggtatttacttggtgatcatgctgggcttcttcaccttcta
gtcataacccatgagaaagaaaaggtcactggcctcaaaattgagctgttgggagaaact
tctattgcatctaccatatcatatctcgacaatgcttttgtctttattggttcaagctac
ggagattcacagcttgtaaagttaaatctgcaacccgatgcaaaaggttcatatgtagaa
gttctggacaggtatgtcaatttgggaccaattgttgacttctgtgtggtggacctggag
cggcaaggccaaggtcaggttgtcacttgctctggagcctataaggatgggtctcttcgg
atagttcgtaatggaataggaatcaatgaacaggcatccgtagagcttcaaggcatcaaa
ggaatgtggtcattaagatctttgactgatgatccatttgacacctttctggttgtaagt
tttattagcgagacaagaattttggcaatgaacattgaggatgagttggaggaaactgaa
atagagggtttctgttcacaagtgcagacattgttctgccattgtgctgtgttcaaccag
cttgtacaagttacatcaagctctgtaagactggtcagttctacaactagagagctcaga
caggaatggaatgctccatcaggttattcaataaatgtcgccactgctaatgccacccag
gttttattggcaactggtgctggccacctcgtctatctggaaatcggtgatgggacactg
acacaggcaaaacatgcacagttagagtgtgagatatcatgcctggacattaaccccatt
ggagagaatcccaactatagtcaactagctgcggttggaatgtggacagacataagtgtc
aggatattttcattgcctgatctaaatctcataacaaaggagccattgggaggagagata
ataccccgttctgttcttctatgttcctttgaagggatatcgtatttattatgtgccctt
ggagacggacacctcttgaacttcctactgaacttgagtactggcgagttgaaagatagg
aaaaaggtgtctttggggacccaacctataacactccgtactttctcatcgaagaatacc
acacatgtatttgctgcatcagataggccaactgtcatttacagcagcaacaagaaacta
ctttacagcaatgtaaacttgaaagaagtcagtcatatgtgtccttttaactctgctgca
tttccagacagccttgctattgcaaaagaaggggaactcagcattggcaccatcgatgat
atccaaaagcttcacatccgctctattccattgggtgaacatgcacggcgtatatgtcac
caggagcagtctcggactttctccatttgtagtatgaaaaaccaatccaatgcagaagaa
tctgaaatgcattttattcgattgttagatgatcaaacctttgagttcatatcaacatac
ccacttgacacatttgagtatggctgctccatacttagctgctccttttctgatgatagc
aacgtgtactattgtgttggaactgcatatgttttgccagaagaaaacgagccaaccaag
ggccgaatactggttttcatagtggaagatgggaagttgcagcttattgctgagaaggaa
acaaagggggcagtatactctttgaatgctttcaatggcaaactgctggctgctattaat
caaaagatccagttatacaagtggatgctccgagatgatggaacacgtgagctgcagtct
gagtgtgggcatcatgggcacatacttgccctctatgtacaaactcgtggagatttcatt
gttgttggtgatctgatgaagtcaatctccttgctaatctataagcatgaggaaggtgct
attgaggagcgagcccgtgattataatgcaaattggatgtcggcagttgagattcttgat
gatgacatttaccttggtgctgaaaataactttaacctattcacagttcggaaaaatagt
gaaggtgccactgatgaggaacgaggccgtcttgaggtggtcggtgagtatcaccttgga
gaatttgtaaatcgattccgacatggttcccttgtcatgcgcttgccagattccgatgtt
ggccagatcccaactgtcatttttgggactgttaatggtgtaatcggggtcattgcttca
cttcctcatgagcaatacctctttttggagaagctgcaatcaaacttaagaaaggtgata
aagggtgttggaggattgagccatgagcaatggagatcattcaacaatgagaagaaaact
gtagatgccaagaatttcttggatggagatcttatcgagtcattccttgatctcagccgt
agtcggatggatgagatatccaaggcaatggagatctccgtggaggagctttgcaagaga
gtggaagagctgacaaggctgcattga
DBGET
integrated database retrieval system