Populus alba (white poplar): 118056945
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Entry
118056945 CDS
T07314
Name
(RefSeq) protein CHROMATIN REMODELING 20 isoform X1
KO
K10779
transcriptional regulator ATRX
Organism
palz
Populus alba (white poplar)
Brite
KEGG Orthology (KO) [BR:
palz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
palz03000
]
118056945
03036 Chromosome and associated proteins [BR:
palz03036
]
118056945
Transcription factors [BR:
palz03000
]
Eukaryotic type
Zinc finger
Cys4 GATA-factors
118056945
Chromosome and associated proteins [BR:
palz03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
118056945
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
ADD_ATRX
Motif
Other DBs
NCBI-GeneID:
118056945
NCBI-ProteinID:
XP_034925278
LinkDB
All DBs
Position
19:complement(7705354..7721807)
Genome browser
AA seq
1486 aa
AA seq
DB search
MEEKNEEVEDIDSASSDSFIGDYENDEPSTSGQDDGTRIQVPLTDQEVEELVAEFLEVES
KAAEAQEALEKESLAKVESDVREELAQSLQGDDLEAAAEDEMTTFREEWENVLDELETES
YHLLEQLDGSGIELPSLYKWIESQAPNGCCTEAWKRRAHWVGSQVTKETIDSVADAEKYL
QIHRPTRRRHGKLLEEGASGFLQKKLSMDGSEAIVENGEVDWVSMKKLFSTSSGEDVASF
GSKHWASVYLANTPQEAALMGLKFPGVNEVEEIEDIDEDSIDPFIAEAVANEKELVLSEE
QRKSYRKVKEEDDAKIDQKLQLHLKQRRQRKRCKQGVSSVIQDMGRNMDEPLSLDDDYNE
VTCQDLKKDKLSVDLVMEHSTGKSNSVFPESALPDATEPRRSKRPNESEDLSINDKKIRT
VNIDSDDEADILEDKSVHNIKVEDQSTVQENTGDPTTDCNPSQGSNEKFLCTACDKVAVE
AHSHPLLKVIVCKDCKFLMEEKMHAKDPDCSECYCGWCGRNIELVSCKSCRTLFCTACIK
RNIGEEFLPKVPASGWQCCCCSPSLLQMFTLQLEKAVGSGDTMITSSDSDSESSDTDGGV
TIRSKRKKKKKIRRIIDDAELGEETKRKIAIEKERQERLKSLKVQFSDKSKMINPASCSG
NLTEGASVEVLGDATTGYVVNVVREKGEEAVRIPPSISSKLKAHQVAGIRFLWENIIQSI
GKARSGDKGLGCILAHMMGLGKTFQVIAFLYTAMRSVDLGLRTVLIVTPVNVLHNWRKEF
MKWTPSEVKPLRVFMLEDVSRERRVELLAKWRAKGGVFLIGYSAFRNLTLGKNVKEPKLA
REICNALQDGPDILVCDEAHIIKNTRADTTQALKLVKCQRRIALTGSPLQNNLMEYYCMV
DFVREGFLGSSHEFRNRFQNPIENGQHTNSMVDDVKIMNQRSHILYEQLKGFVQRMDMSV
VKKDLPPKTVFVVAVKLSPLQRKLYKRFLDVHGFTNGRASNEKMRKSFFAGYQALAQIWN
HPGILQLRKGRDYIGREDNVENVLPDDCSSDENVDYNTIVGAEKSRNQNDFVQGKSDDGF
FQKDWWNDLLHENNYKVIDYSGKMVLLLDILVMSSNVGDKTLVFSQSIPTLDLIELYLSR
LTRHGKKGKFWRKGKDWYRLDGRTESSERQRLVERFNDPENKRVKCTLISTRAGSLGINL
YAANRVVIVDGSWNPTYDLQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLA
ARVVDRQQVYRTMSREEMLHLFEFGDDEKSDTLNDIGQEYRHADTRNVTCQTVNSLKENI
PCSHGSCSSDKIMESLLDKHRQRWIFDYHEHETLLQENEEEKLTKEEQDMAWEVYKRSLE
WEEVQRVSLDDSTFERKPQMSNGASSALDTSSIPVPSMAPPATEASSVAPSKSILRSRVV
QRKCTNLSHLLTLRSQGTKAGCTTVCGECAQEISWEDLNREGKAAR
NT seq
4461 nt
NT seq
+upstream
nt +downstream
nt
atggaggaaaaaaatgaggaagttgaggacattgacagtgcttcaagtgattcatttatt
ggtgattatgagaatgatgagccttctacatctggacaagatgatgggacccgtattcag
gtgcctttgaccgatcaagaagtagaggaattggttgccgagttcttggaagttgagagt
aaggctgcagaggctcaagaagcactggaaaaggagtctcttgcaaaagttgagagtgat
gtgagagaggagttggcacaaagtcttcagggtgatgatttggaggcggctgctgaagat
gagatgacaactttcagggaagagtgggaaaatgtgcttgatgagcttgagactgagagc
taccatttgttggaacaacttgatggatctggtattgagctaccaagcctttataagtgg
atcgaaagccaggctcctaatggttgctgcactgaagcttggaaaaggagggcacactgg
gtgggatctcaggtgaccaaggaaactattgattcagttgctgatgctgagaaatatctt
caaatccataggcctactagacgacgtcatggtaaattattggaggagggtgcaagtgga
tttctgcagaaaaaactttccatggatggaagtgaggctattgtagaaaatggagaagta
gattgggtctctatgaagaaactattctcaactagcagtggggaggatgttgcttcattt
ggtagtaagcattgggcttctgtttacctggccaatactccccaggaagctgcacttatg
ggacttaaatttcccggagtcaatgaggttgaggagattgaagacattgatgaggattcc
attgatccatttattgcagaggccgtggcaaatgaaaaggaacttgttctttcagaggaa
cagagaaaaagttatagaaaggtcaaagaggaagatgatgcaaagattgatcagaaactt
caacttcatttgaaacagaggagacagcgtaagagatgtaaacagggtgttagctcagtc
atccaggacatgggaaggaacatggatgagccactgtctctggatgacgattacaatgaa
gtcacatgccaagatttgaagaaagacaagctttctgtagaccttgtaatggaacattct
acaggtaagagcaattcagttttcccagagtctgcgctgcctgatgccactgaacctaga
aggtccaagcgtccaaatgagagtgaggatctaagcatcaatgataagaagattcggact
gttaacatagacagtgatgatgaagcggacattctggaggataaatcagtacacaacatt
aaagttgaggatcaatcaactgtgcaagagaacactggggaccctacaactgattgcaat
ccttcacagggttcaaatgagaagtttctgtgcactgcctgtgataaagtggctgttgaa
gcgcactcacatccacttttgaaagtaatagtttgcaaagactgtaagttcttaatggag
gaaaagatgcatgcgaaggatcctgactgttctgagtgttactgtggatggtgtggacgg
aacattgaattggtaagttgcaagtcatgcagaacattattctgcactgcttgtataaaa
cggaacattggtgaagagttcttgcctaaggttccagcttctggttggcaatgttgttgt
tgctctccaagtctgctacaaatgtttacattacagttagagaaagctgtggggtctggc
gatacaatgattacgagctctgatagtgattcagagtcctcagatacagatggtggtgtt
acaatcagatctaagagaaagaagaaaaagaagattagaaggatcattgatgatgctgaa
ttaggagaagagaccaagagaaaaattgctattgagaaggaacgtcaagaacgcttgaaa
tccctgaaagtacagttttctgacaaatccaagatgatcaatcctgcaagctgcagtgga
aacttaactgaaggtgctagtgttgaagtgcttggtgatgccacaacaggttatgttgtg
aatgtcgtgagggaaaaaggtgaagaagctgtgaggattcctccaagcatttcgtctaaa
ttgaaagcccatcaggtggcagggataagatttttgtgggaaaatattatacagtcaatt
ggaaaagcaaggtctggtgataaaggtcttggttgcattttagcacatatgatgggcctt
ggtaaaacttttcaggtcatagcttttctgtacactgccatgagaagtgttgatctgggt
ttgagaacagtgctcattgtgactcctgtgaatgtgctgcataactggcgcaaggagttc
atgaagtggacaccttcagaagtaaaaccactccgtgttttcatgctggaggatgtgtcg
agggagagaagagtggaattgcttgcaaagtggagagctaaaggtggtgtattcttgatt
ggctactctgcctttcggaacttgacccttggaaagaatgtgaaggaaccaaaattggct
agagaaatttgtaatgccttgcaggatggacctgatatacttgtttgtgatgaagctcat
ataatcaagaataccagggctgatacaacccaagcactgaaactcgtgaaatgccagaga
aggatagcattaactggatcacctcttcagaacaatctaatggagtattattgtatggtt
gattttgtaagagaaggttttcttggcagcagccacgagttcaggaatcgtttccaaaat
cctatagaaaatggacaacatactaattcaatggttgatgatgtaaagattatgaaccaa
agatctcatattctctatgaacaattgaaagggtttgttcaaagaatggacatgagtgtg
gtgaagaaagacctgccacctaaaactgtatttgtagtggctgtaaagctttctccatta
cagaggaaattgtacaagagattccttgatgtgcatgggttcacaaatggcagggcttcg
aatgaaaagatgaggaagagcttttttgctgggtaccaggcattggctcagatatggaac
catcctggaatattgcaattgaggaaaggtagagattacattggccgtgaggacaatgtt
gagaatgttcttccagatgactgctctagtgatgaaaatgtagattacaatacaattgtt
ggagcagagaagtcaaggaatcaaaatgatttcgttcaagggaaaagtgatgatggattt
ttccaaaaggattggtggaatgatcttctgcatgaaaataattataaagtgattgattat
agtggcaaaatggtattgctgcttgacattttagtcatgtcttcgaatgtgggtgataag
acattggtttttagccagagcatacccactttagatcttatagagctttatctttcaaga
ttaactcggcatgggaaaaagggaaaattctggagaaaaggaaaagactggtataggcta
gatggaagaacagagagctctgaaaggcaaaggttggttgagaggttcaatgatcccgag
aataagcgggtcaaatgtactttgatttctactagggctggttctctggggattaatctc
tatgctgctaaccgggtggttattgttgatggttcttggaatccgacatatgatcttcag
gccatatatcgggcttggaggtatggccagactaaaccggtgtttgcttacagattaatg
gcacatggaaccatggaggaaaaaatctataagcgtcaggtcacaaaggaaggacttgct
gcaagggtggttgatagacaacaagtatataggactatgtccagagaagaaatgttgcat
ctttttgaatttggtgatgatgagaaatctgacacactaaatgacattggccaagaatat
agacatgcagataccaggaatgttacctgccaaaccgtaaattctttgaaagagaacatt
ccttgttctcatggaagctgctcatctgataagataatggaaagcttgcttgacaagcac
cgtcagaggtggatttttgattaccatgaacatgagacccttttgcaagagaatgaagag
gaaaaactaacaaaggaggagcaagacatggcttgggaagtatacaagagatcattagaa
tgggaagaagtgcagcgagtttcccttgatgactctacatttgagcgaaagccacaaatg
tcaaacggagcatcttctgccctagacactagcagcattcctgtgccaagcatggcccct
cccgcaactgaggcttccagtgtagcaccatccaagagcattttaaggagtcgtgtggtg
caacggaaatgcactaatctctctcatttgctaaccctaagaagtcagggcacaaaagct
gggtgcactaccgtctgcggggaatgtgcccaggagataagctgggaagatctgaatcgg
gagggtaaggcagcacggtaa
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integrated database retrieval system
