Populus alba (white poplar): 118056948
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Entry
118056948 CDS
T07314
Name
(RefSeq) cell division cycle 20.1, cofactor of APC complex
KO
K03363
cell division cycle 20, cofactor of APC complex
Organism
palz
Populus alba (white poplar)
Pathway
palz04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
palz00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
118056948
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
palz04121
]
118056948
03036 Chromosome and associated proteins [BR:
palz03036
]
118056948
Ubiquitin system [BR:
palz04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
APC/C
Target recognizing subunit
118056948
Chromosome and associated proteins [BR:
palz03036
]
Eukaryotic type
Sister chromatid separation proteins
APC/C complex
118056948
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_CDC20-Fz
WD40
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_EML_2
ANAPC4_WD40
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_EML
Beta-prop_WDR19_1st
WDR55
EIF3I
Beta-prop_RIG_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_IFT140_1st
Beta-prop_WDR90_POC16_2nd
Beta-prop_HPS5
Beta-prop_EIPR1
Beta-prop_WDR35_TULP_N
Beta-prop_SCAP
Ge1_WD40
Beta-prop_IFT122_1st
WDR90_beta-prop_4th
Beta-prop_SPT8
RMC1_N
Beta-prop_RIG_1st
WDR54
CFAP43_N
Beta-prop_IFT80_2nd
DPPIV_N
Kelch_1
Motif
Other DBs
NCBI-GeneID:
118056948
NCBI-ProteinID:
XP_034925288
LinkDB
All DBs
Position
19:7732576..7734825
Genome browser
AA seq
455 aa
AA seq
DB search
MDAGSMNTSSSLKAQSRFPLQQQFLPRTNSKENLDRFIPNRSAMDMDYARFMLTEGRKGK
ENPAVSSPSREAYRKQLADSLNMNRTRILAFKNKPPAPVEFMPQDHSHHHHQPKTAKPRR
HIPQTSERTLDAPDLVDDFYLNLLDWGSSNVLAIALGSTVYLWDASDGSTSELVTVDDED
GPVTSVNWAPDGRHIAIGLNNSHVQLWDSASNRQLRTLKGGHRSRVGSMAWNNHILTTGG
MDGQIINNDVRIRSHIVETYRGHTQEVCGLKWSASGQQLASGGNDNLIHIWDRSTALSNS
ATQWLHRLEDHTSAVKALAWCPFQGNLLASGGGGGDKSIKFWNTHTGACLNSIDTGSQVC
SLLWNKNERELLSSHGFTQNQLTVWKYPSMVKMAELTGHTSRVLYMAQSPDGCTVATAAG
DETLRFWNVFGVPEIAAKAAAKANPEPFSHLNRIR
NT seq
1368 nt
NT seq
+upstream
nt +downstream
nt
atggatgcaggatctatgaacacttcttcgagcttgaaagcacaatctcgtttccctctt
caacagcagtttcttccaagaacgaactctaaagaaaacttggatagatttataccaaac
aggtcagccatggatatggattatgcccgtttcatgctaacagaagggagaaaaggaaaa
gagaacccagcagtgagctcgccgtcaagagaggcttacaggaagcaacttgccgattcc
ttgaacatgaaccgaactcgaattctagctttcaagaacaagcctcctgcacctgttgag
ttcatgccccaagaccactctcatcaccaccaccagcccaaaaccgccaagcctcgccga
catattcctcagacttctgagaggacattggatgcaccggatcttgtggatgatttctac
ctcaacttattggattggggcagcagcaatgttttagcgatagctcttggaagcactgtt
tatttgtgggatgcttcagacggttccacctcagaattggtcacggttgatgatgaagat
ggacccgttaccagtgtcaattgggctcctgatggacgccatattgccataggcttgaac
aattctcatgtacagttatgggattctgcttccaatagacagctaagaacattgaaagga
ggccacagatcgcgagttgggtcaatggcatggaacaatcacatcctgacaacaggggga
atggatggtcaaatcattaacaatgacgtgagaattagatcacacattgttgagacttac
agagggcacacacaggaggtttgtgggcttaaatggtccgcttcaggtcaacaattagcg
agtggaggcaatgataatctgattcatatatgggatagatctacagcattatcaaactca
gcaacacagtggcttcacaggcttgaggaccatacttcagcagtgaaagccctggcatgg
tgtcctttccaagggaatttgctagcctctggaggaggtggaggagataagagtattaag
ttttggaatacacatacaggtgcctgcttgaactcgattgataccggatctcaggtttgt
tctcttttgtggaacaagaatgaaagggaactacttagctctcatggttttactcagaat
caactcactgtttggaaatatccatcaatggtgaaaatggcagagctcactggccatact
tctagagtcctttacatggctcagagcccggatggttgcacagtggcaacagcagcaggg
gatgaaacactcaggttctggaatgtttttggagttcctgaaattgctgctaaggccgct
gctaaagcaaatccagagccattttctcacttgaatcgcattcgctga
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