Populus alba (white poplar): 118057138
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Entry
118057138 CDS
T07314
Name
(RefSeq) E3 ubiquitin-protein ligase SINAT5
KO
K04506
E3 ubiquitin-protein ligase SIAH1 [EC:
2.3.2.27
]
Organism
palz
Populus alba (white poplar)
Pathway
palz04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
palz00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
118057138
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
palz04121
]
118057138
Enzymes [BR:
palz01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
118057138
Ubiquitin system [BR:
palz04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
SINA (Seven in absentia) proteins
118057138
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GFIT
Motif
Pfam:
Sina_TRAF
Sina_ZnF
Sina_RING
zf-C3HC4_2
DUF7567
FAIM1
Motif
Other DBs
NCBI-GeneID:
118057138
NCBI-ProteinID:
XP_034925520
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Position
15:6013256..6016363
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AA seq
332 aa
AA seq
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MEFDNIECVSSSDGLDEDEIHHHNLQHHLHQFASSKPHNVNNNHNNGNTIVVGGPTAIAP
ATSVHELLECPVCTNSMYPPIHQCHNGHTLCSTCKTRVQNRCPTCRQELGDIRCLALEKV
AESLEFPCKFYNLGCPEIFPYYCKLKHEAICNFRPYNCPYAGSECSVVGDIPFLVAHLRD
DHKVDMHTGCTFNHRYVKSNPREVENATWMLTVFHCFGQYFCLHFEAFQLGMAPVYMAFL
RFMGDETEARNYTYSLEVGGHGRKLTWEGTPQSVRDSHRKVRDSHDGLIIQRNMALFFSG
GDRKELKLRVTGRIWKEQQNPETGVCIPNLCS
NT seq
999 nt
NT seq
+upstream
nt +downstream
nt
atggagtttgataacattgaatgcgtgtcatcatcagatggacttgatgaggatgagatc
catcaccataatttacaacaccacctacatcaatttgcatcatcaaagcctcacaatgta
aacaacaaccacaacaacggtaataccattgttgttgggggtcctactgcgattgctcca
gcaactagtgttcatgagctgctagaatgtcctgtttgtaccaattctatgtacccacca
atccatcagtgtcacaatgggcacacactatgttccacctgtaaaacaagggtacaaaat
cgctgccctacttgcaggcaggaacttggagacattaggtgtttagccctagagaaggtg
gctgagtcactggaatttccttgcaaattttacaacttggggtgcccggagatatttcca
tattactgcaagctcaagcacgaggcaatttgcaacttcagaccatataattgcccctat
gctggatcagaatgctctgttgttggagatattcctttcctggttgcgcatctaagggat
gatcacaaggtggacatgcatacaggatgcactttcaaccatcgctatgtgaagtctaat
ccccgcgaagtggagaatgccacttggatgttgacggtcttccattgttttggtcagtac
ttctgccttcactttgaagctttccagcttggcatggcccctgtttatatggcattcctc
cgtttcatgggtgatgagactgaggctcggaattatacctacagccttgaggtcggggga
catggcaggaaactgacatgggagggcaccccgcaaagtgttcgagatagccaccggaaa
gtcagggatagtcatgatggtctcattattcaacgaaacatggcacttttcttctctggt
ggggataggaaggagctgaagctaagagttaccgggaggatatggaaggaacaacaaaat
ccagaaactggagtgtgtatacccaacctttgtagctaa
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