Populus alba (white poplar): 118057197
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Entry
118057197 CDS
T07314
Name
(RefSeq) E3 ubiquitin-protein ligase RING1
KO
K11982
E3 ubiquitin-protein ligase RNF115/126 [EC:
2.3.2.27
]
Organism
palz
Populus alba (white poplar)
Brite
KEGG Orthology (KO) [BR:
palz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
palz04131
]
118057197
04121 Ubiquitin system [BR:
palz04121
]
118057197
Enzymes [BR:
palz01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
118057197
Membrane trafficking [BR:
palz04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
118057197
Ubiquitin system [BR:
palz04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
118057197
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Zn_ribbon_19
zf-RING_2
zf-C3HC4_2
zf-RING_11
zf-rbx1
zf-C3HC4
zf-RING_UBOX
zf-C3HC4_3
zf-RING_16
zf-ANAPC11
zf-RING_5
DZR
zf-Nse
Anti-TRAP
zf-RING_Vps41
Zn_ribbon_20
zf-P11
Motif
Other DBs
NCBI-GeneID:
118057197
NCBI-ProteinID:
XP_034925591
LinkDB
All DBs
Position
15:complement(7231470..7232842)
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AA seq
344 aa
AA seq
DB search
MSSTTAGVPQLFFCYQCNRTVTINPPTTALSCPNCHEGFLEELDSPDPSPNPFDAGLGPA
LLLDDFASIFGGMNPTPRSSTTSTTTNSSSASPLFQDPDGFNPFVFLQNYLQTMRAGGAN
IQFVIENNPGMGGIDHAGFRVPANLGDYFIGPGLEQLIQQLAENDPNRYGTPPAAKSAVD
NLPDVKVTEELMQSDSSQCAVCKDSFELGEVAKQIPCKHIYHKDCIMPWLELHNSCPVCR
YELPTDDQDYEQRKGNGSNGVNQNVGGGINSGGSISDGDNSDGNAQTPRERRFRIPFPWP
FSSGSGRSAGSSAEASNSRSGNNNDGDSRGNTNFGSDTREEDLD
NT seq
1035 nt
NT seq
+upstream
nt +downstream
nt
atgtcttccaccaccgccggcgtcccgcaactcttcttctgctaccagtgcaaccgaacg
gtaacaataaatccaccaaccaccgctctctcatgccctaactgtcacgaaggtttcctc
gaagaactcgattctccagaccctagccctaaccctttcgatgctggtctcggccctgcc
ctcttactcgacgacttcgcctctattttcggcggcatgaaccccactcctcgatcatcg
accacctcaacaacaacaaactcctcctctgcgtcgccactatttcaagatcccgacggt
ttcaatcctttcgtgttcctgcaaaattacctgcaaaccatgagggccggcggagcgaat
attcagtttgtgattgaaaataatcctggtatgggcggaatagaccacgccggatttcgt
gttccggcgaatctcggagattactttatcggaccagggttagaacaactgattcaacag
cttgcggagaatgatcctaataggtatggaactccgccggccgccaaatctgcggttgac
aatcttcctgatgtcaaggtaacagaggaattaatgcaatcggattcttcacagtgtgca
gtttgtaaggatagttttgagctaggggaggtagctaaacaaattccttgtaagcatatc
tatcataaggattgtatcatgccctggcttgaattgcataattcgtgtccggtttgtaga
tacgagttgcctaccgatgatcaggattatgagcagagaaaagggaatgggagtaatggg
gttaatcaaaatgtgggtggtggaattaatagtggtgggtcgattagtgatggtgataat
agcgatggtaatgctcagacaccgagagagaggaggtttaggattccatttccatggccg
tttagtagtggtagtggtaggtcagctgggtcgtcggcagaggccagcaatagccggagt
gggaacaacaatgatggggattcaagagggaataccaactttggatctgatactagagaa
gaggatcttgattga
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