Populus alba (white poplar): 118057239
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Entry
118057239 CDS
T07314
Name
(RefSeq) RNA polymerase sigma factor sigE, chloroplastic/mitochondrial
KO
K03093
RNA polymerase sigma-I factor
Organism
palz
Populus alba (white poplar)
Brite
KEGG Orthology (KO) [BR:
palz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
palz03021
]
118057239
Transcription machinery [BR:
palz03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
118057239
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r4
Sigma70_r2
GerE
Motif
Other DBs
NCBI-GeneID:
118057239
NCBI-ProteinID:
XP_034925646
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Position
15:complement(6704097..6707754)
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AA seq
512 aa
AA seq
DB search
MGIVSVSSSASWTPLGFNTKFSTCRSTAKRPLIVAFKADKSNETALVAPQEQIPLPIETT
KEKKRHGKSKKSSNRLKAVRSEVSPCTLGVDYNEAAAKLENIYKLSPGTDTSDLEDVNGV
IRRCRQRKRKTSECEKEDDGRTSKIIVRNQAKKAKRLSLQKRIALRIKSDDKLVTSVGKR
KGRRSENEKIDELVREYSSSTDLASLDWKKMKIPPVLTPAEHAWLFKLMQPMKASLQVKE
HLQENSGREPTEGELAEATDMDVLQVRKQIEVGRAARNKLIKHNLRLVLFVINKYFKDFA
NGPRYQDLCQAGVKGLMTAIDRFEPKRRFRLSTYGLFWIRHAIIRSMTLSSFTRVSFGLE
SIRSEIQKAKLELWFQLQRKPTGEEIIEKVGISIERYHEVMRASKPVLSLHSRHKTTQEE
LISGVADVNGGDDRRQSALLRLALDDVLDSLKPKESLVVRQRFGLDGKGDRTLGEIAGNL
NISREMVRKHEAKALMKLKHPTRVDYLCRYVV
NT seq
1539 nt
NT seq
+upstream
nt +downstream
nt
atgggaattgtaagtgtttcgagctcagcttcttggacaccactaggattcaacacgaaa
ttttcaacttgtagatctacggcaaagaggccattgattgtggcatttaaggcagacaaa
tccaacgaaacagctttggttgcaccccaagagcaaatcccattgcccatagaaacaaca
aaggagaagaagagacatggtaaaagcaaaaaatcttctaatcgattaaaagctgtccgt
tctgaagtctctccgtgcaccttgggagtggattacaacgaagctgctgcgaaactcgag
aacatatacaagcttagccctggaactgatacttctgatttggaggatgtaaatggtgtg
attaggagatgtaggcaacggaaaaggaagactagtgaatgtgaaaaggaagatgacggt
agaactagcaaaataattgtgaggaaccaggcaaagaaggctaaacgattgagtcttcag
aaaagaattgcactgaggatcaagagtgatgataaattggtcacttcagttgggaagaga
aagggtcgaaggagtgaaaacgaaaagattgatgaacttgtgagggagtattcttcttca
actgatttggccagcttggactggaaaaaaatgaagatccccccagtccttactccagca
gagcatgcctggttatttaagttgatgcaacctatgaaagcatcccttcaagtgaaagag
catttgcaagaaaattcagggagagaaccaactgagggtgaattagctgaggcaacagat
atggatgtgctccaagtgagaaaacaaatagaggttggtcgagctgcaaggaacaagctt
attaagcacaatctccggcttgtgttgtttgtgatcaacaaatattttaaagactttgca
aatgggccaagatatcaagatctttgtcaggcaggagtgaagggacttatgacagcaatt
gatcgcttcgaacccaaaaggagattccggctctccacttacgggctgttttggattaga
catgccatcataaggtccatgacactctcaagctttacacgtgtttcgttcggcctggaa
tcgataagatcagaaatccagaaagcaaaacttgaattgtggtttcaactgcagaggaaa
ccaacgggggaagagattattgaaaaagtcgggatctccatcgagaggtaccatgaagtg
atgagggcctcaaaacctgttttgtctctccattcgagacacaaaacaacgcaagaagag
ttgattagtggagttgctgatgtcaatggaggtgatgaccggaggcaatcagctcttctc
aggcttgctcttgatgacgtgctcgattctttaaaaccaaaggaaagcctggtggtccgt
cagagattcggactggatggtaaaggggatagaacactaggagagatcgctgggaactta
aatatctcaagagaaatggtccggaagcacgaagctaaagcactcatgaagctcaagcat
ccaacgagagtggattatctttgccgctatgttgtctga
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